KEGG   Psychrobacillus glaciei: PB01_12560
Entry
PB01_12560        CDS       T06231                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
psyo  Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:psyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PB01_12560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psyo03400]
    PB01_12560
Enzymes [BR:psyo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PB01_12560
DNA repair and recombination proteins [BR:psyo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PB01_12560
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: QFF99597
UniProt: A0A5J6STN1
LinkDB
Position
complement(2658310..2658825)
AA seq 171 aa
MDPPSFPEFSLAIKAALQVKAKFDHFELTSLVKTSGGKGIQIYIPLSFNTYSDDDTRVFT
KFFCDFLCEQEPQCFTTERLKKNRHNRLYLDYVQHQEGKTIIASYSPRGNEMGLIATPLK
WDKVCDTIKPNLFTVPSVLDRLYKQANPFRDFRLEIEDQKFANVLNQLRNE
NT seq 516 nt   +upstreamnt  +downstreamnt
ttggatcctccttcctttccagagttttctttagcgatcaaagcagcattacaggtgaag
gcaaaatttgaccattttgagctaacgtcccttgtgaaaacttctggtggtaaaggaatt
caaatttatatcccattgtctttcaatacttattctgatgatgacactcgtgtttttaca
aagtttttttgtgatttcctatgtgaacaagaaccgcaatgtttcacgacagaaagatta
aaaaagaaccgccacaatagactgtacttggactatgttcagcatcaggaagggaaaacc
ataatagcgtcctattccccaaggggtaacgagatggggttaattgcgactccgttaaaa
tgggataaagtgtgtgataccataaagcctaacttgtttaccgttccatccgtcctagat
cgtttatataagcaagctaatccatttcgcgactttcgcctagaaatagaggaccaaaag
tttgcaaatgtccttaaccaactaaggaatgaataa

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