Psychrobacter sp. PAMC27889: E5677_10935
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Entry
E5677_10935 CDS
T06076
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp00550
Peptidoglycan biosynthesis
psyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5677_10935 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psyp01002
]
E5677_10935 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyp01011
]
E5677_10935 (dacB)
Enzymes [BR:
psyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E5677_10935 (dacB)
Peptidases and inhibitors [BR:
psyp01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
E5677_10935 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psyp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
E5677_10935 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QCB31462
UniProt:
A0A7Z1YF73
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All DBs
Position
2638149..2640287
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AA seq
712 aa
AA seq
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MLMLLNSQRCRTPHHNANTDTNLDYNTDNKPKFFNKRLSPFLQAGKRLSLLALLATATPV
FAQAALPEAIQAALARADLSASDMSIVIVPVGDKNTSHLPSPIQVVDSVSATGAEAAITP
DSPKSTQNPIDKGKTSIQKSTEYHSALTTIEKRTIKKYEQKIHAYTDDPYIYQSLESIPT
PLSDSYSSHSHLLNSNQTTPNDDSHDSKNNRNKTATSSINISFSPLLSYQPDIARTPAST
MKLVPSFIALDTLGADFVWHTRVYHTGVIVNDRLYGDLIIQGSGDPKMTHERLQQLLYQV
QAAGIRHIDGDMIVDSAIFHNVTKDPAAFDNDPLRPYNASPDGFLVNFSTIGIKSYPADN
GKAALVYTPQLANYQMPSTIDTRSAACGQARYSLAPQWQPNRLALNASLPNSCQEHAFYI
AYPDAKEFAARVIAAKWQALGNTLSGDVISQETPYDASKKSTPAKGLAAWPISPLPIVSY
ASLNLAQQIYDINHFSNNVMAEQVALSIGAYHHDNSAKVATNKTDIRKNVNEQGTISSSL
DDKSDRLKNKTVKNSSLHNTSLYQFGNPTTDYSTALQTINQWWQSNLDTPPPYLTNGSGL
CRECTITAANLSELLAYAYNRPNFDSYINSLGVAGVSGTIVAHSDRLPDSKAIGRAWIKT
GTLNNVTSMAGYVKGLSGQDYVIVGLINSEQALNAYNARTVLDVALDWTAQH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgttacttaactctcaacgctgccgcacccctcatcataatgccaatactgat
accaacctcgattataatactgataacaaaccaaagttttttaacaaacgtttgagtccg
tttttgcaagcaggcaaacgcttgtctttacttgcgcttttagccactgcaacgccagta
tttgcacaagcagcgctacctgaggccatacaagcggctttggcacgtgcagatttgtcc
gcttctgatatgagcattgtcatcgtgccagtcggtgataaaaacaccagtcatctgccg
tctcccattcaggtcgtcgatagtgtaagcgcgacaggcgcagaagctgctattactcct
gacagtccaaaaagcactcaaaatcctattgataagggtaagacgagtatccaaaaatca
actgagtatcacagtgctctgacgactattgagaaacgcacaattaagaagtatgaacaa
aaaatacatgcttataccgatgacccctacatttatcaaagcctagagagtattcctacc
ccattatccgatagctattcctctcatagtcatctcttaaacagcaatcaaacaactccc
aatgatgacagtcatgattcaaaaaataatcggaataaaacagcgacatcgtctatcaac
atctcgttttctcctttattgagttatcaacctgatatcgcccgtacccctgccagcact
atgaaacttgtgcctagctttatcgctttggatacgcttggtgctgattttgtttggcac
acgcgtgtttatcatacgggtgtgattgtcaatgatcggttatatggcgacttgattatt
caaggaagtggcgatccaaaaatgactcatgagcgtttgcaacagttattgtatcaagtg
caggcagcaggcattcgccatatcgatggtgacatgattgtcgatagtgccatttttcat
aatgtgaccaaagacccagccgcctttgataatgatccactgcgaccttataatgccagc
cctgatggttttttggtcaacttcagcaccatcggtatcaagagctatccggcagacaat
ggcaaagcggctttggtgtatacgccgcaattagcaaactatcaaatgccaagcaccata
gacacacgctcagcggcttgtggtcaagcgcgctacagccttgcgccgcagtggcaaccc
aatcgattggcactcaatgcttctttgccaaacagctgccaagaacacgccttttatatt
gcttatcccgatgccaaagagtttgcggcacgtgtcattgcggcaaaatggcaggcactg
ggcaatacgctgagtggcgacgtcatctcacaagaaacgccttatgatgcaagcaaaaaa
tcaacacccgcaaagggactagccgcgtggccgatatcgccgctacctattgtaagctac
gcgtcactaaatctggcccagcaaatttatgacatcaaccatttttcaaataatgtcatg
gctgaacaagtggcactatcgataggcgcctatcatcatgacaatagtgctaaagtagct
acaaataaaacggatattcgtaaaaatgtgaatgagcaaggaacaatcagtagttctctt
gacgacaaaagtgaccgtttgaaaaacaaaactgtgaaaaatagcagcttacataacacc
agtttatatcaatttggcaacccaacgacggactattcgaccgcgttacagacgatcaat
caatggtggcagagtaatctagacacacccccaccgtatttaaccaacggttcaggactc
tgccgcgagtgtacgattactgccgctaatttaagcgaattactggcgtatgcatataat
cgtccaaacttcgatagttatatcaactctttaggcgtggctggcgtgagtggcaccatc
gtggcgcatagtgatagattgcctgattcgaaagctattggacgtgcttggataaaaaca
ggcacattaaacaacgtgacatcgatggcaggatacgtcaaaggcttatcaggacaggat
tatgtcattgtaggactgatcaacagcgagcaagcactaaatgcctataatgctcgaact
gtattggatgtggcacttgactggacggcacagcattaa
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