Pseudomonas syringae CC1557: N018_20975
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Entry
N018_20975 CDS
T03014
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00521
Streptomycin biosynthesis
psyr00523
Polyketide sugar unit biosynthesis
psyr00541
O-Antigen nucleotide sugar biosynthesis
psyr01100
Metabolic pathways
psyr01110
Biosynthesis of secondary metabolites
psyr01250
Biosynthesis of nucleotide sugars
Module
psyr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
N018_20975
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
N018_20975
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
N018_20975
Enzymes [BR:
psyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
N018_20975
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHG42568
UniProt:
W0MZW3
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All DBs
Position
4637740..4638285
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AA seq
181 aa
AA seq
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MNATRLAIPDVIVFEPKIFGDDRGFFFESFNQKAFEEAVGRPVKFVQDNHSRSAKGVLRG
LHYQIQQPQGKLVRVTAGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGF
VVLSESAEFLYKTTDYWAPEHERSLAWNDTTVGVEWPFSDAPSLSAKDQKAVAFEDAEVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacacgcctcgccattccagacgtcatcgtatttgagcctaaaatctttggc
gacgatcgcggttttttctttgaaagctttaatcagaaggcattcgaagaggctgttggc
cggccagtcaaattcgttcaggacaaccactcccgttcggccaaaggcgtgcttcgcggt
ttgcattatcaaattcaacagccgcagggcaagcttgtcagggtaactgcgggtgaagtg
ttcgatgtggcagttgacctgcgcaaaagctcaccgaccttcggcaaatgggtgggcctg
catctcaccgccgaaaacaaaaaacagctctggatacctgaaggctttgcccatggtttc
gtcgttttgtccgaaagcgcggaattcctctacaagactacagattactgggcaccggaa
cacgagcgcagcctcgcgtggaatgacacgacagttggcgttgaatggccgtttagcgat
gcgccatcactttccgccaaagatcagaaagccgtcgcgttcgaagacgctgaggtgttc
gcttaa
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