Psychrobacter sp. YP14: DLE54_01810
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Entry
DLE54_01810 CDS
T05488
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyy03021
]
DLE54_01810 (rpoH)
Transcription machinery [BR:
psyy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DLE54_01810 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SANT_DAMP1_like
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AWT48392
LinkDB
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Position
complement(426746..427864)
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AA seq
372 aa
AA seq
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MATPKKTKTTKKETAKSSPPTAVTSELDPIDLDIDAELDDDDLALDYDELGDGIDDDLLT
PELAKADDWVSDYPNTSTRDLVPAMPVNLSAPGINLGAYMNSVHQIPILTTEQEQELAHR
YYDDGDVEAARILVMSHLRFVIHIARSYSGYGLPQADLIQEGNLGLMKAVKRFDPNKGVR
LVSFAVHWIKAEIHEFVIRNWRIVKVATTKAHRKLFFNLRSLKKTNNQLTLEEADAIAAD
LNVTRKQVLEMESRLTSYDASFEAQSTDDEDGHYAPQLFLEDGVDPAEMVEDADWEENNT
NALMDAMDTLDERSRDIVEQRWLSEQKSTLHELAAVYNISAERVRQIEKNAMDKIREAMT
IDSVIMPSDDAY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggctactccaaaaaaaaccaaaacaactaaaaaagagacggctaaaagcagcccacct
acagcggtcacctctgaattagatccaatcgatttagatatcgatgcggagttagatgac
gatgatctggctctagattatgacgagcttggtgatgggatagacgatgatctgctgacc
cccgagcttgccaaagccgatgactgggtaagcgactatcccaacaccagcacacgcgac
ttagtgcctgcgatgccggtgaacctatcagcacccggtatcaacttgggtgcttatatg
aattctgtgcatcagatacctatcttgaccacagagcaagagcaagaattggcgcatcgt
tattacgacgatggcgatgtggaggcagcgcgtatcttggttatgtcacacttacgcttt
gtgattcatattgcgcgcagttattcaggctatggcttgccgcaagcagacttaatccaa
gagggcaatttaggcttaatgaaagcagtaaaacgctttgaccccaataaaggcgtgcgt
ctggtgtcttttgctgtgcactggatcaaggctgaaatccatgagtttgtgattcgtaac
tggcgcattgtcaaagtggccaccaccaaggcacaccgtaagctgttctttaacttacgc
agtctaaaaaagaccaacaatcagctgactttagaggaggccgatgccattgccgcagac
ttaaacgtcacccgcaagcaagtgctggagatggagtcgcgtctgacctcttatgatgcg
tcatttgaagcacagtccactgatgatgaagacggccactatgcgcctcagcttttcttg
gaagatggcgttgatccggcagagatggtggaagatgctgactgggaagagaacaacacc
aatgccttgatggatgctatggatactttagatgagcgctctcgtgatatcgttgaacag
cgctggttgtccgaacaaaaatccaccttgcatgagttggcagcggtgtacaatatctca
gctgagcgcgtgcgccaaatcgaaaaaaatgccatggataaaatccgtgaggccatgacc
atcgacagcgtcattatgccaagcgatgatgcttattaa
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