Phyllopteryx taeniolatus (common seadragon): 133488510
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Entry
133488510 CDS
T09737
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03013
Nucleocytoplasmic transport
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133488510 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
133488510 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133488510 (thoc1)
03041 Spliceosome [BR:
ptao03041
]
133488510 (thoc1)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133488510 (thoc1)
Spliceosome [BR:
ptao03041
]
Complex C
Other components
EJC/TREX
133488510 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133488510 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
DUF3179
HsdM_N
Motif
Other DBs
NCBI-GeneID:
133488510
NCBI-ProteinID:
XP_061652434
EnsemblRapid:
ENSPTLG00010022496
LinkDB
All DBs
Position
14:complement(14890638..14898466)
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AA seq
654 aa
AA seq
DB search
MCKMSPPLFDFVEAKDKLTESAKRSLGDKSSKAIINAFHHILGNETEKKTTLDQAFRGVL
GEQIVASSCEDYLSLIYMSIDAVTEGICSATTPFVLLGDVLDSLPLDQCDNIFSFVEENV
STWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEDESTFGLKHTEEKEDGMEVEEGEMGEDEAPASCSIPIDYNLYRKFWT
LQDYFRNPVQCYDKVSWMTFLKFSDETLAVFKSFKLDDNQASKRKLEELRASSGEHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCLLNDDQAAWIEETTKL
VYQLLREIPPDGDKFATMVERILNTEENWIAWKNEGCPSFVKERPSDDKPKRPTRKRAAP
EDFLGKGPDRKIFMGNDELTRLWNLNLDNTEACKSDSREFMPSLDEFFAEAIEQADPVNM
VEEDYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFNSLADYLDSMVSKLAKELPKDIPS
EEIKTGEEDDDENGDNLLKDGNDSPSMPSKVSNQQMDDVAAKLGGRWKSLASHLEMRAAE
LREIEAESEDSDIRAKLLLVTWQDREGAQATVESLVAALNAAGFAKMADELSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagatgtcgcctcccttgtttgattttgtcgaggctaaagacaagcttacggaa
tcggccaagcgatcgctgggcgacaaaagcagcaaagcaataataaacgctttccatcac
atcctcggaaatgagactgaaaagaagaccacactggaccaagcttttcggggggttctc
ggggagcagatcgtggcgtcgagctgtgaggactacctgtctcttatctacatgagcata
gatgcagtcactgaagggatctgctccgccacgacgcctttcgtgctgctgggggacgtg
ctggacagtcttcctctggaccagtgtgacaacatcttctcctttgtggaggagaacgtc
tccacgtggaaatctaactcattctacactgctggcaagaactacctgttgaggatgtgt
aacgatcttctacggcggctgtccaagtctcagaacacggttttctgtggacggatccaa
ctcttcttggctcgtctcttcccgctgtcggaaaaatctggtctgaatctccagagtcag
ttcaacctggacaacatcacagtgttcaacaaaaatgaagatgaaagcacttttggactt
aagcacacggaggagaaggaagacggcatggaggtggaggaaggggagatgggcgaagac
gaagcgcccgcgtcgtgctccatccccatcgactacaacctgtacagaaagttctggacg
ctgcaggactacttcaggaacccggtgcagtgctacgacaaagtgtcctggatgaccttc
ctcaagttctcggacgagacgctggccgtcttcaagagcttcaagctggatgacaaccag
gcgtccaagaggaagctggaggagctgcgggcctccagcggggagcacgtctactttgcc
aagttcctcaccagcgagaagctgatggacttgcagctgagcgacagcaacttccgccgt
cacattctgctgcagtatttgatcctcttccagtacctcaaaggacaagtcaaattcaaa
agctccagctgcttgctgaacgacgaccaggctgcgtggatcgaggaaaccacgaagcta
gtttaccagcttctcagagagattcctcccgacggggacaagttcgccaccatggtcgaa
cgtatcctcaacaccgaggaaaactggatcgcttggaaaaacgagggctgtccgagcttc
gtgaaagaacggccgtccgacgacaaacccaaacggcccaccaggaagcgagcggctcca
gaagacttcctgggaaaagggccagacagaaagatcttcatgggaaacgacgagctgact
cgcctgtggaacttaaacctggacaacactgaagcctgcaagtcagacagcagggagttc
atgccctcgctggatgaattcttcgccgaagccattgagcaggctgaccccgtcaacatg
gtggaggaagattacaaggttgttcggaacccaaactacggctggcgagcgttacgactg
ctctccagaagaagtccgcacttctttcagcccaccaaccagaagttcaatagcctggcc
gactacttggacagcatggtcagcaagctggccaaggagctgcctaaggacatcccctcg
gaggagatcaagacgggcgaggaggacgacgacgaaaacggagacaatctgctcaaagac
ggcaacgacagcccgagcatgccgagcaaggtgagcaaccagcagatggacgacgtggcg
gccaagctgggcggccgctggaagtcgctggcctcgcacttggagatgcgggcggccgaa
ctacgcgagatcgaggccgagagcgaggactccgacatccgggccaagctgctgctggtc
acctggcaggaccgggaaggggcgcaggccactgtggagagcctggtggcagccctcaac
gccgccggctttgccaaaatggcagacgaacttagtgaagcttga
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