Candidatus Phycorickettsia trachydisci: phytr_7330
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Entry
phytr_7330 CDS
T05372
Name
(GenBank) ribosomal large subunit pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptc03009
]
phytr_7330
Enzymes [BR:
ptc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
phytr_7330
Ribosome biogenesis [BR:
ptc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
phytr_7330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AVP87671
UniProt:
A0A2P1P8T2
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All DBs
Position
844628..845584
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AA seq
318 aa
AA seq
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MIVEDKLPVRLDRFLKRCYPLITQGVIQTLLRSKKVKVNSVRIKEASLRLNHGDKVEVFA
NLDEYSQETEAINPLAKSLSQKLLGEYKIFENDNFLVINKPAKLATQGGTKINICIDDGL
KYLNSLGSSLKLVHRLDKETSGLILIAKGYDAAAKLSYGFREKKIYKTYLALVKGTPKQK
QGIIKIEDEITKYKLLEYDIIKDVSLIEFKPITGKEHQIRRHALEIGTYILGDKKYGPNQ
KDKYMMLHSAGITIDKEIFGSEYSFNIPLPKYFMDDNKKPATYIDSNFDKLSSALKKNIQ
RRKLAKKNEEQDSQDNQQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagaagataaattaccagtaagactagatcgatttttaaaaagatgctatccc
cttattacccaaggtgttattcagactcttttgagaagtaaaaaagttaaagtgaatagc
gtacgtattaaggaggcatcactacgtctaaatcacggtgataaagtagaagtatttgca
aatctagatgaatacagccaagaaactgaagctattaatccattggcaaaatctttaagt
caaaaactacttggagaatataagatttttgaaaatgacaactttttagtaataaataaa
cctgcaaaacttgctacccaaggaggaactaagattaatatttgcatcgatgatggatta
aaatatttaaactcacttggatctagcttgaaattagtccacaggctcgataaagagacg
agcgggttaatactgattgcaaagggatacgatgctgctgctaaacttagttacggattt
cgcgaaaagaaaatttataagacttatttagcgctcgtgaaaggcacacctaaacaaaag
caaggtattatcaaaattgaagatgaaataactaaatataaactcttagaatatgatata
attaaggatgtttccttaattgaatttaagccaattacaggtaaagagcatcagattagg
cgtcatgctcttgagattggcacttatattttaggtgacaaaaaatatggcccaaaccaa
aaagataagtacatgatgctacattcagcaggcataacaattgacaaggaaatctttggg
tctgagtatagttttaacatacctttaccaaaatattttatggatgataacaaaaaacca
gcaacttacattgattcaaactttgataaattatctagcgcactaaaaaagaatattcaa
agaagaaaacttgctaaaaaaaatgaagagcaggatagccaagataatcagcaatag
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