Pyrenophora teres: PTT_07832
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Entry
PTT_07832 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_07832
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTT_07832
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
PTT_07832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
EFQ94468
UniProt:
E3RIG6
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MAADKEETAAQILKWYSNLYSRRVDLVGDFAGSERFLVHGESLLLQCFTDPHLDFDPGFQ
LLHAAYAVEKFLQGLVSRGCNFHIAFFDEHQDLCIPQDAPPAISEKYLLARVAIIRHLKV
NLPDAVPEVEVHAFASSSSDAFAEYLRSTDVYFVLCHDGASFNDVRKRMISEKSLHSLKG
EDRELQERQQEYKSSFRTFIYSMMQRGYSAALVNGLEWRDTKVVTTVLEHARSMTLDVSS
AEPHTNKRLTDVVDLSHMRGFMQTIRTSCDQLLTEREYLTILVASKLSSSNKDLSSVLLH
QAALLSELSLSERGIKHSEIPEEISSFILEFCQEARKFVGSPAWSEAFAGHPDCDMADLI
DGRLFASCARTPSAEPSEHLQTLLKATAALNGQELPSHPTVSSTGTGSDPTNENDEDSSA
YKVLPFSNDIFDPHLAPIQLEVSRQGGKADATTANIFREVTHWHNQKSLNQKTKVVVEKD
PKIAKKALRRNQFFMAEMTSYAASLTNAVGKVLDPETITLGDKSKTTPAQSLENKRPKQQ
QHRQSTKNINASKQAMMADIAASSKRKDEENAKQWYQAWTVSCAGLEKQVDLASRYNKAR
QYLADRNEAQRQVIGPDVRIYMLNVLLEMWVRFCRDNEKEKGLYVAALLFDTARSLCNYA
TVTKTIAKCLATTVERLKLPTLEVPTAQGDRKLPFKFALEETLVSDLALTLSPEEFQLLH
CGPYFDRTIDSAPDSRVAFEPDAWQRRVLDEIDARRSLLVIAPTSAGKTFISFYAMKQVL
EANNDDVLVYVAPTKALVNQIAAEIQARFSKNYKYSQSVWGIHTRDYRINNPTGCQILVT
VPHILQIMLLAPSNAKSWSERVKWIIFDEVHCIGQAEDGMVWEQLLLMAPCPIIALSATV
GNAEAFNDWLSASQKAAGNELVMVQHPHRYSDLRKFIYTPPTKRDAASYLPLPNNRSFAQ
LGLDEHADFAFLHPVASLINRTRGLPSDLTLEARDCLTLWQSMYKHQTESYPVDKSLDPS
TILPTVIKKADIIKWQSGLKKLLSDWMADDNSPFQVVREDLSRSLAKFQDASRIDEAETD
AADNEAQLDELGMAISHDISSILPLLADLQQQDALPGIIFNYDRAICEKMCQTLMKQLVD
AEVAWKETSPKWKVKLQQWEDWKKEVARREKQGLRGDASKGMTKQDQMKEAANVEVSAFA
SFDPNKPLDGFHFADHKKLSQEEFAVHAKELRYRGVEEWLIDGLMRGIGVHHAGLNRKYR
YCVEMLFRKGYLRVVIATGTLALGINMPCKTVVFSGDSVFLSALNFRQAAGRAGRRGFDM
LGNVVFHGVALSKIHKLISSRLPDLNGHFPITTTLVLRLFTLLHSSENAPFAVRCVNSLL
SQPRLYLGGEDAKMTVLHHLRFSIEYLRRQHLLDGQGVPLNFAGAVSHLYFTENSSFAFH
ALLKDGYFHELCAKIDTNKEVVLRELMLTMSHLFGRVHCRQADEEYVQEIVKKSPSIVFL
PPMPDHAANVLRKHNKTTLDIFTAYVRTFVDQHIQEPDNTLPLTDVKVGGEKSKSAKGHS
KNIKARSSFVALSGYDDKFESIHDLCSTSRSGVFLEEAVVPHVGLYPEDSDLPLNAYLYD
FFNHGDVNALIKANKIRRGDVWFVLNDLSMTLATITTSLSSFLGLAAESDLDFIDVRGGG
DDEEENREDKMLPTDAATEASSTTTGSANKGPAKQELTIQPKRKLKKKVEESWEDEMGSD
SAESEVEESWDAEDDEDKEPPAWEEGEGLLNVLKAFKALKEDFDTKFRAMWA
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgacaaggaggagacggcggcgcagatcctcaaatggtactcaaatctctac
agccgcagggtcgatctggtcggcgattttgcaggtagcgagcgctttctcgtacacggc
gaatcactcctgctccagtgttttaccgacccgcacctcgactttgaccctggcttccaa
ctactacacgctgcctacgctgttgagaagttcttacaaggtctcgtttctcgaggatgt
aatttccatattgcttttttcgacgaacaccaagatctttgcataccccaggatgcgccg
ccagcaatcagcgagaagtacttgcttgcacgagtagccatcattcgccatctcaaggtc
aacctgccggacgctgtccccgaggttgaggtccatgctttcgcgtcatcatcatccgac
gctttcgcagagtatctgcgttccacagatgtctactttgtgctttgccatgatggagct
tccttcaatgacgtccgtaagaggatgatctcggaaaagtcgctacactctctaaagggc
gaggaccgagagcttcaggagcgccaacaggaatacaagtcgtcattccgcacattcatt
tacagtatgatgcagcgaggctacagtgccgcacttgtcaatggactagagtggcgagac
accaaggtggtcacaacagtccttgaacacgcacgttcgatgactttggatgtttcctca
gctgagccccatacaaacaagaggttgaccgacgttgttgatctatctcacatgcgcggg
tttatgcagactatcaggacgtcatgtgaccagcttcttactgagcgcgaatacctgaca
atattggtcgcttccaagttatcatcctcgaacaaagacctgtcgtctgtacttctgcat
caggcagcactgctctcggagttgtctctctcagaacgcggcatcaagcattctgagatc
cctgaagaaatcagttcgttcatcttagagttctgccaagaggcacgcaagtttgtcggc
agtcctgcgtggtcagaggcttttgctggtcacccagattgcgacatggcggatctgatc
gatggaagactcttcgcttcgtgtgctcgcactccctcagctgaacccagcgagcacctc
cagactctactcaaagccactgcggctctgaacggtcaagaacttccatcacatccgaca
gtctcctccacaggtacaggatctgatcccaccaacgaaaacgacgaagacagctcggca
tacaaggttttgcccttttcgaacgacatcttcgacccgcatctggcccctatccaactg
gaagtgtcccgccagggaggcaaggcagacgcaacaacagccaacatcttccgggaggtt
actcactggcacaaccaaaaatcactgaaccaaaagacaaaggtggtcgtagaaaaagac
ccaaagatagccaagaaagctctccgccgaaaccagtttttcatggcagagatgacatct
tacgccgccagtcttacaaatgctgtgggtaaagtgctggatccagagaccatcactctt
ggagacaagtcgaaaacgacacccgcccagagccttgagaacaaacgcccaaagcaacag
cagcacagacagagcaccaaaaacatcaatgcctctaaacaggctatgatggcagacatt
gcagcaagctccaagcgcaaagacgaagagaatgcaaagcagtggtatcaggcctggact
gtctcatgtgctggcttggagaagcaagtcgacctggcttcaagatacaacaaagcgaga
cagtacctcgccgaccgcaatgaggcccagcgccaagtcatcggtcccgacgtgcgcatt
tacatgttgaatgttctcctggagatgtgggtacgattctgtcgtgataacgagaaagag
aagggcctgtacgtggccgcgttgttgttcgacaccgcacggtctctctgcaactacgca
accgtaactaagacgattgcgaaatgtctcgccacgacagtagagcgtctgaagctacca
acgctagaggtacctacagctcaaggcgaccggaagctgcctttcaagtttgccctggaa
gagacattggtatccgacctggccctgaccctctctccagaggagttccagttactccac
tgcggaccgtactttgaccgcacgatcgactctgcacccgattctcgtgtggcattcgag
ccggacgcgtggcaacgacgtgtgttggatgaaatcgatgctcgtcgaagtcttcttgtc
attgcccccacatcagcaggaaagacctttatatccttctacgccatgaagcaagtcttg
gaggctaacaatgatgatgttctcgtctatgttgccccgacaaaagccttggtcaatcag
attgccgccgaaatccaggctcgcttctctaagaactacaagtacagccagtctgtatgg
ggtattcacacgcgagactaccgaatcaacaaccctacgggttgccagattctggtaaca
gtgcctcatatcctacagatcatgctgttggcacctagcaatgctaagagctggtcagag
cgggtcaaatggatcatcttcgacgaggttcattgtattggacaggcagaggacggtatg
gtctgggagcaattgctactgatggccccttgcccgatcattgccttgtcggctacggtt
ggaaatgctgaagcttttaacgactggctttcagcctctcagaaggctgcaggtaatgag
ttggtgatggtgcaacatccacacaggtactcagatcttcgaaaattcatctacacgcct
cccaccaaacgcgatgctgctagctacctgcctctcccaaacaatcgctcgtttgcgcaa
ctcggacttgatgagcacgcagactttgccttcttacatccggtagccagcttgatcaac
cgtacccgcggcttaccatctgatctgaccctcgaggcgcgcgactgtctgaccctttgg
caatccatgtacaagcaccaaacagaaagttatccagtagacaagtctttggacccttcc
actatacttccaaccgttatcaagaaggcggatatcatcaaatggcagtctggtctcaag
aagcttctttccgactggatggctgatgacaattctccttttcaggtggtccgtgaggat
ctcagcaggtctctggccaagtttcaagatgcttcgcggattgatgaggctgagactgac
gctgctgacaatgaagcacaactggatgagctaggaatggcgatcagccacgatatctcg
agcatactgcctttgctagctgatctccaacagcaggatgcgctcccaggcatcattttc
aactacgaccgtgcaatctgtgaaaaaatgtgccaaacactcatgaagcagctcgtggac
gccgaggttgcctggaaagagacaagccccaagtggaaggtcaagttgcaacagtgggag
gactggaagaaggaggttgcacggcgagagaagcagggtcttcgtggtgatgcttccaag
ggcatgaccaagcaggatcagatgaaggaagccgccaacgtcgaagtgagcgcattcgca
tctttcgacccgaacaagcccctcgacggcttccactttgccgaccacaagaaattgtca
caagaagagttcgcagtacatgccaaagaattacgttatcgtggagtagaggaatggctg
atcgacgggctcatgcgtggtatcggtgttcatcacgccggtttgaaccgaaagtacagg
tactgtgttgagatgctcttccgaaagggctacctacgtgtcgtcatcgcgacaggtaca
ctcgccctgggtatcaacatgccatgtaagactgtggtcttttcaggagactccgtgttc
ttgagtgctctcaacttccgtcaggccgctggacgtgctggtcgtcgaggtttcgatatg
cttggaaacgtcgtgttccacggagttgctcttagcaagattcacaagcttatcagctcg
cgcctaccagatcttaacggacatttccccatcacgacaacattggtactgcgcttgttc
acattactgcactcgtccgagaacgcgccttttgctgtccgctgcgtcaactccctgctc
tcacagccgcgcttatacctaggtggtgaagacgcgaagatgacggtgcttcatcactta
cggttttccatcgagtatctccggaggcaacatcttttggatggacagggtgtaccttta
aactttgcgggcgccgtgtcccatctttatttcacagagaactcatcattcgcgttccat
gcgctgctaaaggatgggtacttccacgagctgtgcgcaaagattgacaccaacaaggag
gttgtgctgcgcgaactcatgcttacaatgtcacacttgtttggtcgtgtccattgccga
caagccgacgaggagtatgtacaggaaattgtcaagaagagcccatcgattgtattccta
cctcccatgccggatcatgccgcaaatgtccttcgcaagcacaacaagaccacactcgac
atcttcacggcttacgtgcgcacttttgtcgaccagcacattcaagagccggataacacc
ctccccttgaccgatgtgaaagtcggtggagagaaatccaaatcagccaagggccactct
aagaatatcaaggctcgttcctcattcgttgctctctcgggatacgacgacaagtttgag
tcgattcacgatctgtgctcgaccagccgttctggtgttttccttgaagaagctgttgtc
cctcacgttggcctctatcccgaagactctgatcttccactgaacgcctacttgtacgac
ttcttcaaccacggtgatgtgaacgctctgatcaaggctaacaagattcgtcgcggagac
gtatggttcgtgctcaatgacttgagtatgacccttgcgaccatcactacaagtctgtca
agcttcttgggtcttgcggcagagtccgatctcgacttcatcgacgtccgtggcggtggt
gatgacgaggaggaaaaccgtgaagacaagatgctgccgaccgacgctgcgacagaggct
agctcaaccaccaccggttccgcgaacaagggccccgccaagcaggaattgaccatccag
cccaagaggaagctcaagaagaaggttgaggaatcttgggaggatgaaatgggtagtgac
tcagcggagtcggaggtagaagagagttgggatgctgaagatgatgaggacaaggaaccg
cctgcttgggaggagggtgaaggcttgttgaacgtgcttaaggctttcaaggccctcaag
gaggactttgacaccaagttcagggccatgtgggcctag
DBGET
integrated database retrieval system
