Piliocolobus tephrosceles (Ugandan red Colobus): 111544843
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Entry
111544843 CDS
T07491
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111544843 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111544843 (PATL1)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111544843 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
111544843 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
111544843
NCBI-ProteinID:
XP_023071289
Ensembl:
ENSPTEG00000029180
LinkDB
All DBs
Position
13:13778004..13809492
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AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLYQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTITSLLQQLM
NLPQSAATPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDQQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggactgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttacaaccccagccaggaagc
ctgaattccagtatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattggcagtcctcctgttagagctgtccccataggcaccccacctaaacagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtgcctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctctgctacaccacctccacagcagcaccctcctggcccaggaccccacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccgtcgactcttgtatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagatagaggaagtcaccggagcagtcatcaagatcatctccgaaaggatcca
tatgccaatctcatgttgcagcgggaaaaggattgggtctccaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaaatacaaggtgatggccctaagaaggagcgcaccaag
cttatcacccctcaggtggccaaactggagcacgcctataagccagtgcaatttgagggc
tctttgggaaagctgaccgtttctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacaaaagaaaaacaagttcgagacaagaggaga
aaaacccttgtcataattgagaaaacctacagcttactccttgatgtggaggactatgaa
agacgttatctcctaagtctagaagaagagcgacctgccctaatggatgagagaaagcac
aaaatttgtagcatgtatgacaacttgagggggaaattgcccggacaagagaggcctagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctatcatcttccatcagtgactatcaccagccttttgcaacagctaatg
aacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctccttatcctcctgagccgtggtgaagacctacag
agttcagaccctgctacagaatcaacgcaaaataatcagtggacggaggtgatgttcatg
gcaacacgagaacttctacgaattccccaagcagccctggccaagccaatctctatacct
acaaacctagtgtccctcttttctcgctatgttgaccagcagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgataa
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