Piliocolobus tephrosceles (Ugandan red Colobus): 111546307
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Entry
111546307 CDS
T07491
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111546307 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111546307 (LIG4)
Enzymes [BR:
pteh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111546307 (LIG4)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111546307 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
111546307
NCBI-ProteinID:
XP_023073398
Ensembl:
ENSPTEG00000034294
LinkDB
All DBs
Position
X:5675901..5686761
Genome browser
AA seq
923 aa
AA seq
DB search
MATPQETIKISFYSWDSLVNRGNGACPRPDLCSTLERIQKSRGRADKIRHFREFLDSWRK
FHDALHKNQKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFALIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIK
KSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAVELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGIK
FDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVG
GYWGKGSRGGIMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDK
EWHECMTLDDLEQLRGKASGKLASKHLYVGGDDGPQEKKRKAAPKMKKVIGIIEHLKAPN
LTNINKISNIFEDVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPDTYCVIAGSKNIR
VKNIILSDKHDVVKPAWLLECFQTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVD
TDLNQLKEVFSGIKNSYEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDLYVVIND
LSTKTEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDRCELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgcaggaaaccatcaagatctcattttacagctgggattccctggttaac
agaggtaacggagcttgcccgaggccagatttgtgttcaactttagaacgaatacagaaa
agtagaggacgtgcagacaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccaaaaagatgtcacagactctttttatccagcaatg
agactaattcttcctcaactagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagctttatattgagttgcttaatttacctagagatggaaaagatgccctcaaa
cttttaaactacagaacgcccactggaactcatggagatgctggagactttgcattgatt
gcatattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcagttgccagcaataattctgctaaaagaaaagacctgataaaa
aagagccttcttcaacttataactcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtgttagtcagcaaactatcttttctgtttttcat
aatgatgctgttgagttgcataatgtcactacagatctggaaaaagtctgtaggcaactg
catgatccttctgtaggactcagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcagatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggtgaacgtatgcaaatgcacaaagatggggatgtatat
aaatacttctcccgaaatggatataactataccgatcagtttggtgcttctcctactgaa
ggttctcttaccccattcattcataatgcattcaaaacagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaacacacaaactttcatgcaaaagggaattaag
tttgatattaaaagaatggtagaagattctgatctgcaaacttgttattgtgtttttgat
gtattgatggttaataataaaaagctagggcatgagactctgagaaagaggtatgaaatt
cttagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaagct
catactaagaatgaggtaattgatgcactgaatgaagcaatagataaaagagaagaggga
atcatgataaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcactggactaatggatgaattggacattttaattgttgga
ggatattggggtaaaggatcacggggtggaatcatgtctcattttttgtgtgcagtagca
gagaagccccctcctggtgagaagccatctgtgtttcatactctctctcgggttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagcct
tttcataaaaaagctccaccaagtagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagatcgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgagaagataagagatgacaaa
gaatggcacgagtgcatgaccctggatgacctagaacaacttagggggaaagcatctggt
aagctcgcatctaaacacctttatgtaggtggtgatgatggaccacaagaaaaaaagcga
aaagctgctccaaagatgaagaaagttattggaattattgagcacttaaaagcacctaac
cttactaacattaacaaaatttctaatatatttgaagatgtggagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaacttggtggttat
atagtacaaaatccaggcccagacacgtactgtgtaattgcagggtctaagaacatcaga
gtgaaaaacataattttgtcagataaacatgatgttgtcaagcctgcatggcttttagaa
tgttttcagaccaaaagctttgtgccgtggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttatttcgttgat
acagacttgaaccaactgaaggaagtattctcgggaattaaaaattcttacgagcagact
cctgaagaaatggcttctttgattgctgatttagaatatcgatattcctgggattgctct
cctctcagtatgtttcgacgccacaccgtttatttggacttgtatgttgttattaatgac
ctgagtaccaaaactgaggggacaaggttagctattaaagccttggaacttcggtttcat
ggagcaaaggtagtttcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacttttaagagaaagtttaaaatc
ctaaaagaaagttgggtaactgattcaatagataggtgtgaattacaagaagaaaaccag
tatttgatttaa
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