Piliocolobus tephrosceles (Ugandan red Colobus): 111555477
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Entry
111555477 CDS
T07491
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pteh04040
]
111555477 (SCN10A)
Ion channels [BR:
pteh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111555477 (SCN10A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
111555477
NCBI-ProteinID:
XP_023087382
Ensembl:
ENSPTEG00000019224
LinkDB
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Position
2:97827176..97922969
Genome browser
AA seq
1959 aa
AA seq
DB search
MEFPIGSLETNNFRRFTPESLVEIEKKIAAKQAAKKAREKHREQKDQEEKTRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDTFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKIIVG
ALINSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKPDI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKL
FQEALEKLRKEQEVLAALGIDTTSLHSHNGSPLTSKNASERRHRIKSRVSEGSTEDNKSP
RSDPYNQRRMSFLGLASGKRRASHGSVFHFRSPGRDISLPEVVTDDGVFPGDHESHRGSL
LLGGSAGQQGPLPRSPLPQPSNPDSRHGEDEHPLPPTSELAPGAVEVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTNLAQKYLIWDCCPMWVKLKTI
LFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFRRPCPFPRPKAEPELVVKLPLSSSK
AENHIAANTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGEEDA
QSAQQEVIPNGQVRQLQQVERCEDHLTPRSPGTGTSSEDLAPYLGETWKDESVPQAPAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVDTTKSPWDM
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLVFS
AILKSLQNYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGDLDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPHVPRAEEEAASLPDEGFVAFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQNEDEATSTEVTAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccattggatccctcgaaactaacaactttcgtcgctttactccggagtca
ctggtggagatagagaagaaaattgctgccaagcaggcagcaaagaaagccagagagaag
cacagggagcagaaggaccaagaagagaagactcggccacagctagacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactgatcggggagcccctggag
gatctagacaccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
gtcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgag
tatgtcttcaccgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctcaatgagttcacgtacctgagagatccttggaactggttggattttagcgtcatt
accctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattaaaaacagtttctgtgatcccaggcctgaagatcattgtgggg
gccctgattaactcagtgaagaaactggctgatgtgaccatcctcactatcttctgcctg
agtgtttttgcgttggtggggctgcaactcttcaagggcaatctcaagaataaatgtgtc
aagaatgatatggctgtcaatgagacaaccaactactcatctcacagaaaaccagatatc
tacataaacaagcgaggcacttctgatcccttactgtgtggcaatggatctgactcaggc
cactgtcctgatggttatatctgccttaaaacttctgacaatccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcatatgaggagcagaaccaggcaaccattgatgaaattgaagcaaaggagaagttg
ttccaggaggccctcgaaaagctccggaaggagcaggaggtgctggcagcgctggggatt
gacacaacctctctccactcccacaacggatcacctttaacctccaaaaatgccagtgag
agaaggcacagaataaagtcaagagtgtcagagggctccacagaagacaacaaatcaccc
cgttctgatccttacaaccagcgcaggatgtcttttctaggccttgcctctggaaaacgc
cgggctagccatggcagcgtgttccatttccggtcccccggccgagatatttcactccct
gaggtagtcacagacgatggagtctttcctggagaccacgaaagccatcggggctctctg
ctgctgggtgggagtgctggccagcaaggccccctccctagaagtcctcttcctcaaccc
agcaaccctgactccaggcatggagaagatgaacacccactgccacccactagtgagctt
gctcctggagctgttgaagtctcggcattcgatgcaggacaaaagaagactttcttgtca
gcagaatacttagatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaacttgaggagtctgaacagaagtgcccaccctgcttgaccaac
ttggctcagaagtatctgatctgggattgctgccccatgtgggtgaagctcaagacaatt
ctctttgggcttgtgacggacccctttgcagagctcaccatcaccttgtgcatcgtggtg
aacaccatcttcatggccatggagcatcatggcatgagccctaccttcgaagccatgctt
cagataggcaacattgtctttaccatattttttactgctgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtcttcaagctggccaagtcctggcccaccttaaacacactcatc
aagatcattggaaactcagtgggggcactgggtaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagctcctaggggaaaactaccgtaataaccga
aaaaatatctccgcgccccatgaagactggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccagaaatccatatgcctcatccttttcttgacggtgatggtgctgggg
aacctggtggtgcttaacctgttcatcgccctgctattaaactctttcagtgctgacaac
ctcacagccccggaggacgatggggaggtgaacaacctgcaggtggccctggcacggatc
caggtctttggccatcgtaccaagcaggctctttgcagcttcttccgcaggccctgccca
ttcccccggcccaaggcagagcccgagctggttgtgaaactcccactctccagctccaaa
gctgagaaccacattgctgccaacactgccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcatcgctaatcctactgtgtgggtctctgtg
cccattgctgagggcgaatctgatcttgatgacttggaggatgatggtgaggaagatgct
cagagcgcccaacaagaagtgatccccaacggacaggtaagacagctgcagcaagttgag
aggtgtgaggaccacctgacacccaggagcccaggcactggaacatcttctgaggacctg
gctccatacctgggtgagacgtggaaagatgagtctgttcctcaggcccctgcagaggga
gtggacgacacaagctcctctgagggcagcacggtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcggatgacctagaagagccagatgactgcttcacagaa
ggatgcattcgccactgtccctgctgcaaagtggataccaccaagagtccatgggacatg
ggctggcaggtgcgcaagacttgctaccgtattgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggcctttgaagactattacctggac
cagaagcccacggtgaaagctttgctggaatacactgacagggtcttcacctttatcttt
gtgttcgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgacaagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaacccttcgtgctctgcggcca
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccatccatcatgaacgtcctccttgtctgcctcatcttctggctcatcttcagcatc
atgggtgtgaacctcttcgcagggaagttttggaggtgcatcaactataccgatggagag
ttttctcttgtacctttgtcaattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataacgttgcaatgggttac
cttgcacttctgcaggtggcaacctttaaaggctggatggacattatgtatgcagctgtc
gattcccgggaggtcaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
ttcgtcatcttcatcattttcggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaagctgggctccaagaagccccagaagccc
atcccacggcccctgaacaagttccagggttttgtctttgacattgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccagagtgaagaaaagacgaaaattctgggtaaaatcaaccagttctttgtggct
gtcttcacgggcgaatgtgtcatgaagatgttcgctttgaggcagtactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctctccattgcgagcctggttttttct
gcaattcttaagtcacttcaaaattacttctccccgacactcttccgagtcatccgcctg
gcccgaataggccgcatcctcagactgatccgagcggccaaggggatccgcacactactt
tttgccctcatgatgtccctgcccgccctcttcaacatcgggctactgctcttccttgtc
atgttcatctactccatcttcggcatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcagccggctgggatggcctcctcagccccatcctcaacacggggcccccctac
tgtgaccccaatctgcccaacagcaatggcaccagaggggactgtgggagcccagccgtg
ggcatcatcttcttcaccacttacatcattatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaacgtggccacggaggagagcaccgagcccctgagt
gaggacgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcagactttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggtccctggagataag
atccactgcttggacatcctttttgctttcaccaagaatgtcctaggagagtccggggac
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaatca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctccaacacccca
catgtgcccagagctgaggaggaggctgcatcactcccagatgaaggctttgttgcattc
acagcaaatgaaaactgtgtactcccagacaaatctgaaactgcatctgccacatctttc
ccaccatcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatct
agctcaatacaaaatgaagatgaagccaccagtacagaggtgactgcccctgggccctag
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integrated database retrieval system
