Paraburkholderia terrae: C2L65_08080
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Entry
C2L65_08080 CDS
T05318
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pter
Paraburkholderia terrae
Pathway
pter03030
DNA replication
pter03430
Mismatch repair
pter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2L65_08080 (holB)
03430 Mismatch repair
C2L65_08080 (holB)
03440 Homologous recombination
C2L65_08080 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pter03032
]
C2L65_08080 (holB)
03400 DNA repair and recombination proteins [BR:
pter03400
]
C2L65_08080 (holB)
Enzymes [BR:
pter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2L65_08080 (holB)
DNA replication proteins [BR:
pter03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2L65_08080 (holB)
DNA repair and recombination proteins [BR:
pter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2L65_08080 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
AUT59561
UniProt:
A0A2I8EJR0
LinkDB
All DBs
Position
1:complement(1805186..1806244)
Genome browser
AA seq
352 aa
AA seq
DB search
MIYPWQTDDWNRLQQLRAHWPHALLLHGQAGIGKLRFAQHLAQGLLCESALPDGQPCDTC
AACTWFKQGNHPDYRIVLPEALAAEAGFTSAAADEKAEKEKADADEGGKKTRTPSKEIKI
EQVRALLDFCGVGSHRGGVRVVVLYPAEALNVAAANALLKTLEEPPAGVIFLMVSARIDR
LLPTIISRCRQWPMTTPSPQSATAWLAQQGVDDAPGLLAEAGGAPLAALALASDENRPLR
DWTLKQLAAGPNCDAFACGETLQKLPVPLVLGWLQRWMYDLLAQSTVGTTGTPRYFPAAS
AALSRCASQADANGFARFMRTVTRQRAVENHPLNARLVFEELFLGYRDLFVQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccgtggcaaaccgacgactggaaccgcctgcagcaattgcgcgcccactgg
ccgcatgcgctgctgcttcacgggcaggccggcatcggcaagctgcgctttgcccagcac
ctggcgcagggcctgctgtgcgaatcggcgctgcccgacggccagccgtgcgacacctgc
gcggcatgcacatggttcaaacagggcaatcaccccgactaccggatcgtgctgccggag
gcgctcgctgcggaagcgggcttcaccagcgccgccgccgatgaaaaggctgaaaaagag
aaagccgacgccgacgaaggcggcaagaaaacgcgcacgcccagcaaggaaatcaagatc
gaacaggtgcgggcgctgctggacttttgcggcgttggctcgcatcgcggcggcgtgcgc
gtcgtcgtgctgtatcccgccgaagcgctgaacgtcgccgcggccaacgcgctgctgaaa
acgctcgaggagccgcctgcgggcgtgattttcctgatggtgtcggcgcgcatcgaccgg
ctgctgccgaccatcatcagccgttgccgccagtggccgatgacgacgccgtcgccgcag
tccgccactgcatggctcgcgcaacagggcgttgatgatgcgccgggcctgctcgcggaa
gcaggcggcgcaccgctcgcggcgctggcgctggccagcgacgaaaaccgtccgctgcgc
gactggaccctgaaacagctggctgccggtcccaactgcgacgcgttcgcgtgcggcgag
accttgcagaagttgcccgtgccgctcgtgctcggctggctgcagcgctggatgtacgat
ctgctcgcccagtccacggtcggcacgacgggtacgccacgttatttcccggcggcgtcg
gcggcgctctcgcgttgcgcatcgcaggccgacgcgaacggtttcgcgcgcttcatgcgg
acggtcacgcggcaacgcgcagtcgaaaaccatccgctcaacgcgcgactcgtgttcgaa
gaactgtttctcggttatcgcgacctgttcgtccagtag
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