Puntigrus tetrazona (Sumatra barb): 122327200
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Entry
122327200 CDS
T08985
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
122327200
NCBI-ProteinID:
XP_043078348
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Position
22:complement(13831484..13849120)
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDASGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSTRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPAE
VGCLSGLMTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRVTSLATLYLRF
NRITTVEKDIKNLAKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLSKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPAGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaagagagagaacccaaagccgaaggg
aaatccaaaaccaaagggaaagatgccaaagacgggaagaaagacgcgagtggcgcttcg
cctgcggtggccttcaccttggacagtacgataaagcggcccaacccgccgcccagcacg
cgcaaaaaatccagcaacgcggaggtcattaaggagctaaacaagtgccgcgaggagaac
tcaacgcgcctggacctctcaaagagatccattcatctcctgccctcttccatcaaggag
ctgacccagctgaccgagctgtacctgtacagcaacaagctgcaaagcttgccggctgag
gtgggctgcctgtcagggctgatgacactggcactcagcgagaactctctcaccagcttg
cccgactcactggacagcctgaagaagctgcgcatgcttgacctgcggcacaacaagctg
cgcgagatcccggctgtagtctaccgcgtcacctccctcgccacactctacctgcgcttc
aatcggattaccaccgtggagaaagacatcaagaatctggccaaactcaccatgctcagc
atcagagagaacaagattaaacagctgcctgcagagatcggtgagctctgtaatttgatt
acgctggatgtagcccacaaccagctggagcaccttcctaaagagatcggcaattgcact
cagatcaccaaccttgacctgcagcacaatgaacttcttgacctacctgagactataggt
aacttgtcaagtataaaccgcctgggtctgaggtacaaccgtctatcagcgatccctcga
tctttatcaaagtgccgagagctggaggagctcaacctcgaaaacaacaacatctcagtg
ttaccagagggtcttctctccagtctggtgaacctgacaagtctgacgttggcacgaaac
tgtttccagtcttacccagcgggcggcccatcccagttctccaccatctactcactcaac
atggagcacaaccgtatcaacaagatccctttcggcatcttttcccgagccaaagtgctc
agcaagctcaatatgaaggacaaccagttaacgtctcttccactggattttgggacatgg
accagtatggtagagctgaacctggcaacaaaccagcttaccaagattccagaggatatc
tgtggacttgtgtctttagaggtcctcatattgtccaacaatcttttgaagaagttgcct
catgggataggaaacttaaggaaactgcgagagcttgacctggaggagaacaaactggag
tccctcccgaacgagattgcctaccttaaggatctgcagaaacttgtgttgaccaataat
cagctgaccactttgccgcgaggaatcggtcacctgaccaatctgacttacctgggcttg
ggagagaacctgctgcagcacctaccggaagagatcggcacactggagaacctggaggac
ctgtacctgaatgacaaccctaacctgcatagcctgccgtttgagttggcgctatgcagc
aagctgtccatcatgagcatagagaactgccctctcagccaccttccgccgcagatcgtc
gccggaggcccttccttcatcatccagttcctcaagatgcagggtccctaccgtgccatg
gtctga
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