Puntigrus tetrazona (Sumatra barb): 122327555
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Entry
122327555 CDS
T08985
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122327555 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122327555 (wdr33)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122327555 (wdr33)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
DUF5621
Motif
Other DBs
NCBI-GeneID:
122327555
NCBI-ProteinID:
XP_043078937
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Position
2:complement(5808893..5823804)
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AA seq
1127 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDIETNSVAAIPGMGIPEQLKAAMEQEQTGKEMVAEPEMSIPGLDWGMEE
VMLKDQKKPPTKKVPYAKPIPAQFQQAWAENKVPAMPPGEVPKERKDEKTADGKKKTQAE
IEQEMAALQYTNPMLLEQLKIERMAQLQEQGIPSPGGQSGPMPPFPGQGGPMPPPTQGFP
QSMPPQQMSHNMPPMGPGGMPGPFIPPGQMGPPGPPMHQGPPPQGMMGPDMHGPPRHPGS
HRNMGPQGPPGMPPGPRGMQGPPPTGMPPGSGGMMGPPPRGQGPPQGGMMHQDMRGPVPH
GNMVGPQGPMPGSMMGPPPRTHGNMQGMGNMHGMGPPPGGMHGPPNNMQGPPGNMQGPPP
YMQGKPPHMGEGNRGQFSQGQNPGPQSMMHGIGQQGPNGKGDGPRGPPNHHMGPPPDRQG
PGQGSDGGQYWGDDGGYQEGWRRGPGQEYSVGHRGISGGPWEGQERFSSHDGEYMGHDRY
DGYEDSGEEFDQRPRRPPHGEDSYRRGGPSGRGGMGVYQDEYGGDESFDSQEDMGQGWGG
RGRPRGGPPRGGGVGRKGLLPTPDDYPCHYEGGRNQEGWEGGRDSGHESYREGQRPDHNM
HDSPSPASRERSSSLQGMDMASLPPRKRPWHDGPGTGDMDSPGAGPDERGAGRPSPRDEG
GYGHPSRGGRGGWSRGGPPNPGGPGPNVGPNTRRGAPRGVMRGGRGR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatattggctcacctcctcggtttttccatatgcctcggttccagcaccag
gcacctcgtcagctgttctacaagagaccggactttgcccagcagcaggctatgcagcag
ctcactttcgatggcaagcgcatgaggaaagctgtgaatcgcaagaccattgattacaat
ccgtctgttatcagacatcttgagaatcgattgtggcaacgtgatcatcgagatttccgt
gctattcaaccagatgcaggctgctacaatgatcttgttcctccagttggtatgcttaat
aaccctatgaatgctgttacaacaaagtttgtcagaacctccaccaacaaagtcaaatgc
cctgtgtttgttgtgcggtggactcctgaaggcaggcgacttgtaacaggtgcatccagt
ggggagtttactttatggaacgggctcacatttaactttgagacaattcttcaggctcat
gatagccctgtcagggcaatgacctggtctcacaatgacatgtggatgttgactgccgac
catggaggttacgtgaaatactggcagtccaacatgaataacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctctcccacggataataaatttgccacttgc
tctgatgatggaactgtacgtatctgggactttctccgctgtcatgaagaaagaattctg
agaggtcacggagcagatgtgaagtgtgttgattggcatcccacgaagggcttggtggta
tctggcagcaaggatagccagcaacctatcaaattttgggacccaaagactggacaaagt
ttggcaacactacatgcacataaaaacacagtcatggaggtgaagtggaaccttaatggc
aactggctgttgacagcgtcacgtgaccatttatgcaaactgtttgacattcgcaacctc
aaagaggagctgcaggtttttagaggacataagaaagaagccacagctgtagcttggcac
ccagttcatgaaggcttgtttgccagtggaggctctgatggatcactgctattttggcat
gcaggtgtggagaaagaggttggaggaatggagatggctcatgaaggaatgatttggagt
ctagcctggcaccccctgggccacatcttgtgttctgggtctaatgaccataccagcaaa
ttttggacaaggaatcgaccaggggataaaatgcgggacagatacaatctgaacttgttg
cctggaatgtcagaagatggagtggagtatgatgacatagagaccaatagtgttgcagcc
attcccggcatggggatcccagaacaactgaaggctgcaatggaacaagaacaaactggc
aaagagatggtggcagagcctgagatgagcattccagggctggactggggaatggaagag
gtgatgctgaaggaccaaaaaaagcccccaacgaaaaaggttccttatgcaaaaccaatt
ccagctcagtttcaacaggcctgggcagagaataaggttccagcgatgcctcctggagag
gttccaaaggaaaggaaggatgagaagacagcagatggcaaaaagaagacccaagcagag
attgagcaggaaatggctgccctgcagtatacaaatccaatgttgctcgagcaactgaag
attgagcgaatggcacagttacaagagcagggaatcccttcccctggtggacagtcaggg
ccaatgccaccctttccagggcagggtggtccaatgccccctcccacacaaggattccct
cagtccatgcctccacaacaaatgtcgcacaacatgcctccaatgggaccgggtggaatg
cctggtcctttcattcctccaggccagatgggtccaccaggacctcccatgcaccagggt
ccccctcctcagggcatgatgggtccagacatgcatggacctccacgtcatccaggctct
cacaggaacatgggtccccagggtcctcctggcatgccacctggccccagaggcatgcaa
ggacctcccccaacaggaatgcccccaggttctggtggtatgatgggaccaccaccacga
ggacaagggccaccacagggaggtatgatgcatcaggacatgaggggtcctgtgcctcac
ggaaacatggtaggccctcagggacccatgccagggagtatgatgggacctccacccagg
acgcatggtaatatgcagggcatgggaaatatgcatggaatggggcctcctccagggggt
atgcatggaccaccaaataacatgcaagggccaccaggaaacatgcagggccctccacca
tatatgcaaggcaaaccaccacacatgggtgaaggaaatcgtggacagttcagccaggga
cagaatcctgggcctcaatcaatgatgcatggaataggacagcagggacctaacggaaaa
ggagatggtcctcgaggaccacctaaccaccacatgggacccccaccagatcgacagggc
cctggtcagggctcagatggaggccagtactggggtgatgatgggggttatcaagagggc
tggagaagaggccctgggcaggaatactctgtaggtcacagaggaatctctggaggccca
tgggagggccaggaaaggttttcctcacatgatggagagtacatgggacatgaccggtat
gatgggtatgaggactctggtgaggagtttgaccagaggccgagacggccaccacatgga
gaagactcatacaggaggggtggcccaagtggtcgtggtggaatgggcgtataccaagat
gagtatggtggagacgaaagctttgattctcaagaagacatgggccagggttggggagga
agaggaagaccacgtggtgggccaccaagaggaggtggtgtaggaagaaaggggcttctc
ccaactcctgatgattatccatgtcactatgaaggcggaagaaaccaggagggctgggag
ggagggcgagattcaggtcatgagagttatcgggagggtcagcgcccagaccacaatatg
catgacagtccttctccagccagcagagaacgatcctcctctctacagggcatggacatg
gcctcgctgcctccacgcaaacggccatggcatgacggaccaggcactggtgacatggac
tcccccggtgcagggcctgatgaaagaggagcgggtcgaccatcaccaagagacgaagga
gggtatgggcatccatcacggggaggaagaggtggttggagccgtggtgggccgcccaac
ccaggtggtcctggtcctaatgtgggtccaaataccaggcgaggggctccacgtggtgtt
atgaggggaggtcgcggacggtag
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integrated database retrieval system
