Puntigrus tetrazona (Sumatra barb): 122331548
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Entry
122331548 CDS
T08985
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122331548
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122331548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122331548
NCBI-ProteinID:
XP_043084995
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MTEEQDKSGAEPPCSPAASSSSMSPEESDSDAPASPAALMIAKLEREDERFPACIRDAVS
QVLKGYDWSLVPMPARGSGAIKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKT
LGKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQSEAEAGADLTQH
MYKAEPGMGRLGAPADHTGQPHGPPTPPTTPKTDLHHGGKPDPKHEGRRLLDGTRQNIDF
SNVDISELSTDVISNMEAFDVHEFDQYLPPSGHAPDGQSGGSYASPYGGGASWSRKGPAA
SSPAATSEAGQHRAHIKTEQLSPGHYSEHSAGTASTAPRASAGSASFASSQCDYTDLQSS
GYYSPYPGYPSGLYQYPYFHSSRRPYGSNILNGLPMPPSHSPSASWDQPVYTTLSRP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcaggataagtccggcgcggagccgccgtgcagccccgccgcctcgtcc
agctccatgtcccccgaggagtccgactcggacgcgccggcgtcccccgcggcgctcatg
atcgcgaagctggagcgcgaggacgagcgcttcccggcgtgcatcagggacgcggtgtcc
caggtgctcaagggctacgactggtccctggtgcccatgccggcgcgcggcagcggcgcg
atcaagagcaagccgcacgtcaagagacccatgaacgcgttcatggtgtgggcgcaagcg
gcgcgcaggaagctggcggatcagtacccgcacctgcacaacgccgagctcagcaagacc
ctcgggaagctctggaggctgctgacggagagtgaaaagaggccgttcgtggaggaagcc
gagagactgagagttcagcacaagaaggatcacccggattacaaataccagccgaggcgc
cgaaagagtgtgaagcccggtcagagcgaggctgaggccggcgccgatctcacccagcac
atgtataaagctgaaccggggatgggtcgactgggggctccggccgatcacacaggccag
cctcatggacccccgacaccccccacgacgcccaaaacggacctccatcacggaggaaag
ccagaccccaagcacgagggccggcgcctgctcgacggcacgcgacagaacatcgacttc
agcaacgtggacatctcggagctgagcacggacgtcatcagcaacatggaggccttcgac
gtgcacgagttcgaccagtacctgcccccgagcggccacgctccagacgggcagagcggc
ggctcctacgcttcgccctacggcggcggggcctcctggagccgcaagggccccgcggcg
tcctcgccggccgccaccagcgaagccggtcagcacagggcgcacattaaaacggagcag
ctgagcccgggtcactacagcgagcactcggccggcacggcgtctacagcgccacgggcc
tcggccggctccgcctccttcgccagctctcagtgtgactatacagacctccagagctcg
ggatactacagcccgtaccccggctacccgtccggcctctaccagtacccctacttccat
tcctcgcggaggccatacgggagcaacatcctcaacggcctgcccatgccgccctcacac
agtccctcggccagctgggatcagccggtttacaccacgctctcccggccgtga
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