Puntigrus tetrazona (Sumatra barb): 122341054
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Entry
122341054 CDS
T08985
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122341054
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122341054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
zf-RING_10
zf-RING_6
DUF4407
LRIM1_dimer
TRAF3_RING
DUF3829
OmpH
MRP-S31
Motif
Other DBs
NCBI-GeneID:
122341054
NCBI-ProteinID:
XP_043090309
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MAEARFSQDELMCPVCLDLLKDPVTTSCGHSYCKSCITGCWDQEDQKRVYSCPQCRQTFS
TRPALSRNTMLTELVEKLKKTKLSADCDAGAGDVQCDVCPGRKYRAVKSCLVCLESYCQT
HFERHEEFHSRKPHKVTEATGRLQEMICQKHEKILEIFCRTDQTCICVLCTIIEHKNHDI
IPAADQRTEKQKQLKETQKTLQQRIQQKEKDLQQLREAVESHKRSAQTAVEDSEKIFTEI
IRSIERRRSELIRLIRDQEKQAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIQFL
QSFQSLSAPPESTDVNDNVFMSLISLVDLRESVHQLGHKLEDFCKEELKKFSDRVTFSNI
VPRTRNDFLRYSHQLTLDLNTVNKRLRLSENNRKITFTETDQSYPDHPDRFDYFCQVLCR
ESVCGRCYWELEWSEGVFISVSYKNISRKGEGDQCLFGYNDQSWSLECYPFRCSFRHNNT
ETDLPVKSISRRIGVFVDQGAGTLSFYSVSDTMSLIHTVQTTFTQTLYPGFLVDTGSSVK
LC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagattttctcaggatgagttgatgtgtccagtgtgtctggatctcctg
aaggatccggtgactacttcctgtggacacagttactgtaagagctgtattacaggctgc
tgggatcaggaggatcagaagagagtctacagctgtcctcagtgcagacagaccttcagt
acaagacctgctttatctagaaacaccatgctgactgaactggtggagaaactgaagaag
accaaactctctgctgattgtgatgctggagctggagatgttcagtgtgacgtctgtcct
ggaagaaaatacagagccgtcaagtcctgtctggtgtgtctggagtcttactgtcaaact
cattttgagcggcatgaggagtttcattcacgtaaaccacacaaagtgaccgaagccact
ggacgactgcaggagatgatctgccagaaacatgagaagatcctggagattttctgccgc
actgatcagacatgtatatgtgtgctgtgtacaattattgaacataaaaaccatgacatt
ataccagctgcagaccagaggacagagaaacagaagcagctgaaggagactcagaagacg
ctccagcagagaatccagcagaaagagaaagatctgcagcagctgagagaggctgtggag
tctcataagcgctctgctcagacagcagtggaggacagtgagaagatctttactgagatc
atccgctccattgagagaagacgctctgagctgatacgactgatcagagatcaggaaaag
caagccgtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccagttcctg
cagagtttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatgtcttc
atgtctctcatctctttggttgatctgagagaatctgttcatcagctgggacacaaactg
gaggatttctgcaaagaggagctgaagaagttctcagacagagttacattcagcaacatt
gttcccagaaccaggaacgacttcctacgatattcccatcagctcactctggatctgaac
acagtgaataaacgtctccgtctatctgagaacaatagaaagattactttcactgaaacg
gatcagtcgtatcctgatcatccagacagatttgattatttttgtcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagctggagtggagtgaaggtgtgtttatatca
gtgtcatataagaacatcagcaggaagggagagggtgatcagtgtttgtttggatataat
gatcagtcctggagtttggagtgctatccattcagatgctcattcagacacaataacaca
gaaactgatcttcctgtgaagtccatcagcagaagaataggagtgtttgtggatcaggga
gcaggaactctgtccttctacagtgtctctgacacaatgagcctcatccacacagtccag
accacattcactcagacgctctatcctgggtttttggttgatactggatcatcagtgaaa
ctgtgttga
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integrated database retrieval system
