Puntigrus tetrazona (Sumatra barb): 122346927
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Entry
122346927 CDS
T08985
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122346927 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122346927 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122346927 (usp13)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122346927 (usp13)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122346927 (usp13)
Ubiquitin system [BR:
ptet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122346927 (usp13)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122346927 (usp13)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
122346927
NCBI-ProteinID:
XP_043097753
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All DBs
Position
6:13697792..13722434
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AA seq
859 aa
AA seq
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MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNALSPYKKQESDSWEEEIQVSRHARSLRQQE
NGVRIPPSGWKCTKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETNFPLAVK
LDTITPDGADVYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRVSDWE
VIQEAGLKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFNTQIAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKQQQRGISPKMFKALVSKGHL
EFSSNRQQDAHEFLLHLINLVERNSSGSENPSDVFRFLVEERVQCCQTQKVRYTQRVDYL
MQLPVPLEAASNREELIAYESKRKEAEENLRPAPEPVRARIPFTACLQAFTEPDNVPDFW
SSALQAKSAGVKTSRFASFPEYMVVQIKKFTFGVDWVPKKLDVSVDVPDFLDLNRLRATG
LQAGEEELPDLTPPIVIPEDTRDSTTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAVPSYMEADLPSPSLPTTSALDSQPPEESISILTS
MGFPRHHTIQALKASNNNLERAFDWIFTHPDCEDESEAMSDTADTEPNDNIFSNANAHSD
SSLSPDQDLSSPRVRDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWLIYNDHKVCLS
ERPPKDLGYMYFYRRLSSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccacagatctgggagagctactggtcccgtacatgcccaccattagagtgccgagg
acgggagacagggttttcaagagcgaatgcgcgttttcctacgactctcccgaatcggag
ggaggtctgtatgtgtgtatgaactcattcctgggtttcggaagagaacatgtggagaga
cattaccgtaagactggacagagtgtgtacatgcacttaaaacgacatgtgaaagagaaa
gccacaggtgctgccgggggtgccataccaagaagaaggaatggaaaagtctttttagat
ttagagcttaaccgtgattttaacggagatgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtgacaatagcctgtgatgccgtcctcaatgctttatctccatacaaaaagcaggagtct
gactcgtgggaagaggagattcaagtatctagacatgccagaagtctcagacagcaggag
aatggggttcgaattcctcccagtggctggaagtgcaccaagtgtgaaatgcgagagaac
ctgtggctaaacctgacggatggctctgtcctctgtgggaagtggttctttgatgggagc
ggagggaacggacatgcccttgagcactacaaagaaaccaacttccctctggcagttaaa
ctcgacacaatcaccccagatggagcagacgtttactcttttgatgaagaagaagcagtg
cttgatcctcacatatcagaacatttgttacactttggaatagatatgttgcaaatgcaa
aggacagagaatggccatcatacagacaaccacgtccagccacgtgtgagtgactgggaa
gtgattcaggaggcgggtctaaaactaaagcctgtctatggctcaggatatacaggcatt
aaaaacttgggcaacagctgctacctgagcaccactatgcaagtgctttttagtattcca
gagttccagagagcgtatgttgggaacttacagagaatatttgactactcgccccttgat
ccaactcaggatttcaacacacagatagcgaaactcggtcatggacttctctcaggccag
tactcaaaacctccaatgaaatcagaacttattgaacaggtgatgaaagaagaatacaag
cagcagcaaagagggatttcacctaagatgttcaaagctctggtcagtaaaggacatcta
gagttctcctcgaaccggcaacaagatgctcacgaattcttgctgcacttaattaacctg
gtagagaggaacagttcaggctcagagaaccccagcgatgtgttccgcttcttagttgag
gaacgagtgcagtgctgtcagacacagaaggtgcgctacacacagcgggtggactacctt
atgcagcttcctgtacctttagaggcagccagcaacagagaggagttaatagcatatgag
agtaagcggaaggaagctgaggagaacttgcggcccgctccagagccggtgagagcccga
atccccttcactgcctgtctgcaagccttcactgagcctgacaatgttccagacttctgg
agctctgcgctgcaagccaagtcagccggggtgaagacttctcgtttcgcatccttccca
gagtacatggtcgtacaaataaagaagttcacatttggggtcgattgggtgcccaaaaag
ttagatgtttctgtagatgtacctgatttcctggacttgaatcgcctccgggccacaggg
ctacaggctggagaagaggagttgcctgaccttacacctcccattgtcattcctgaagac
accagagacagtacaacaaacaactctttggaatctccagaaatagatgaatcatccgtg
atgcagctggcagagatgggtttccctctggaagcctgtcggaaagcagtgtactacact
gggaatatgggagcagagatggcctttaactggataatagcacacatggaagagccagat
tttgcagagcctctggcagttccctcttacatggaagcagacctgcccagccccagcctc
cctacaaccagtgcactggacagccagcctccagaagagagcatctccatcctcacctcc
atgggcttccccagacatcacacaatccaggctctcaaagcctcgaacaacaacttggag
cgcgcgtttgactggatattcacacacccagactgtgaggatgagagcgaggctatgtca
gacacggcagacacagaaccgaatgataacatcttctcaaacgccaatgcccacagcgac
tcctcactgtctccagatcaggacctgtccagcccccgtgtcagagacggacccggacgt
tacgaactgtttgccttcatcagtcacatgggagcatccacaatgtctggtcattatgtg
tgtcatatcaaaaaagagggcagatggctgatttacaacgaccacaaagtatgtttgtca
gagaggccccctaaagacttgggctacatgtacttttaccggcgcctgtcaagctgctag
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