Puntigrus tetrazona (Sumatra barb): 122348042
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Entry
122348042 CDS
T08985
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122348042 (frem1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
CReP_N
Motif
Other DBs
NCBI-GeneID:
122348042
NCBI-ProteinID:
XP_043099228
LinkDB
All DBs
Position
7:38423401..38455786
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AA seq
2042 aa
AA seq
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MTAKDRTYLSFLLLGLFQQIQGSLVKTNLGLKVKRGQSVFLQEEDLQFLIPRAKDACKLE
VVLNEPITQRVGALTPQVFDCHFLADEVKYTHNGCPILKEDTVELRLYRFTESETYSERF
SLRVQITEPDCNVIKFGSQNLEVPEFYGLSNVLDGNVLSFHYEHRHNIECTVRVTTLETH
LPVHGQLVTGKLEKPEGPRGDEPDSFVSLRRQLDNKARAHCKSEDCLKGLKLLTVTKVPC
TDFLKMGIRYHHTDPPSPDIDYISIRLDLTDTRSRSIIQSEQAWIPVTIKDAMPNQPPKP
AFMSVFILEVDQFILTPLSTATLDAEDDETPKRRLVFNITKAPSEGFVAHLSDHTRPIGS
FTWTDLNDMLISYQPPNASHTQRRNYEVEFEVHDFYFEKSQPVIVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQFQIVDNDNPKAVKIITVDGLQHGRLSVRGGKGFMFTVNDIK
DGVVRYHHDDSDTTKDYIVFRITDGLHQTRHKFPINVLPKDDSPPFLITNMVLELSEGQT
ALLRGSVLQACDLDSSDDYIMFNITRPPQAGEIVKMPGPGITGYTVTRFLQKDLFHSIIY
YRHAGGEVFDDSFEVVLSDFHDPPNLSEPQVVVVQIQPVPDQPPREAAGVTRHLTVNETD
VIYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYGGSDAGRLFLVDSIPKLTKDPNAPM
LRLFTQHAVNYMKVAYMPPILDIGPFPQHVQFVLSVTNQQGSTTAGICFNITVLPVDNLA
PEVQVKPLAVDEGGESWVSEDHMRLSDQDSLQDSLRVKLRAGPQHGSVYLDGTATSPGQT
ITVRDLKSLKVRYRHDGSETEHDAIKFIATDGINVADFVLRIKVTLVNDEVPVLVAGLKP
VLVCAEGREVPVTIEYICATDPDSDDSTLMYMIARQPYHGVVQRNGIIVDRFIQADVTAG
VISYRHTGQEIGLRPRHDVVTFVISDGESGPVSSCCSDRAAQTPEVQHALPVYDLNITVY
PVNNQPPSIALGEVFMVDEGGSASVTVTHLRVEDQDSAPEDLNIILVAPPQFGYIENILP
SPGFEKSNVGISIASFTYRDVLNGHVNYVQSRHQRMEPTTDQLMLHVSDGKQESPSVPLY
IIIRPTNDEIPELLARNITVREGEMKALDSSIISAVDLDVPRERLMFSVVQQPLHGSVMS
VPHGNDVTLYKRGSEIPVEHFTMDDLRSGMTLMYAHDDSESEEDAFIVQLSDGKHQLQKH
VRVKVLPVNDEEPQIIRNSGVEMEAGESRLISGAVLGAHDKDTPSSEIIYVFESVPSHGV
VQMKVGTDWVSLSAGMNCSQQVLDMNQLRYLHTSRPGAAAADFFAFHLMDGKNRSPAQRF
HITVKELEKGDIALFVKPVRTSRGERVILTTDVLLAVDGTDRPEELLYVFTLPPEHGHVE
YIKHTGVQIQSFSQLDIAANLVCYVHDNRATSPKETLRFVVSNGISTRNGTLEILVEMTD
KVLPTLVRNGGLRVPQGSSMTLSPDALLLSDPDSPHSSLSYRLYEPPQYGQLLLKGQPLL
AGSHFSQQNIQDLDVAYRHSGGASQIDRFRFTASDSTERGFLLDGKVQTEPVFFTLQIEA
LDSAAPQIVVLETLWKVELLKDGRYGIFISSRELKAQDLSSVDADLIYHILRAPYFGYLE
NYTSGEFVRQRFSQKDLNRRNIIYIINSALDALTDSLEFAVSDSLGNTGASHKLEFSWAS
VQLSRTEYVTCEGQGSVSLTIQRKGNVQDSSYVTLQVKELTASAGKDFIAASSLIQFDPG
AVSRVWKVEIVQDSLEEAEETFEVDLVSPVAAVLKDNSKAAVFIKDANGQCRERRFKAEA
GLQGREVQPGPYPQHGSIQVETLPFSQGYIRGDSDVIVQTPPATKKRLRVIGNGKVVQPS
ETIRQGSDVVYRYHGLTSLAVEEDRSDSGSHRKARVQVTSWGRQSRTEPQHANTRAAQRP
RTQPSSKPCARSSLAFCITTRARLSCSAATGTPGGPGPPTTRLRNRRSVLEDGRNATTTA
TC
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaagacaggacgtatttgtctttcctcttgctgggtcttttccagcagatt
cagggctctctggtaaaaaccaatcttggtctaaaggtgaagcgagggcagtcggtcttt
ctgcaggaggaggatcttcagtttctcatacccagagccaaagacgcctgcaagctggag
gttgtgctgaacgagcccataacccagcgggtcggcgctctgaccccgcaggtttttgac
tgtcactttttggctgacgaagtgaaatacactcataacggatgtccgattttgaaagaa
gacaccgttgaactccgtctgtacaggtttacggagtcggagacgtacagcgagcggttc
tctctccgtgtgcaaatcacggagccggactgtaatgtgatcaagtttggatcgcagaac
ctcgaggtgccggagttttatggcctctccaatgttctggatggcaacgttttgtctttc
cactatgaacacagacataatattgagtgcacagttcgggtgactactctggagacgcat
ctacctgttcacggtcagctggtcactggaaagctggagaaaccggaggggccgagaggg
gatgaaccagacagctttgtttctctacggagacagctggataataaagccagagctcac
tgcaagagcgaagactgtctaaagggtcttaaactgctgacggtcaccaaagtaccgtgc
acagatttcctcaagatgggcatccgttatcaccacactgaccctccatctccagacata
gactacatctctataagactggacctcacagacacccgcagcaggagcatcatccagtcg
gagcaggcctggatcccggtgaccattaaggacgcgatgcccaatcagccgcccaagcct
gcttttatgtccgtgttcatcttagaggtggaccagttcatcctgactccgctctccaca
gcaacgctggacgccgaggatgacgagacgcccaaacggcggctggtgttcaacatcacc
aaagcccctagcgagggcttcgtcgctcacctgtctgaccacaccagacccatcggctcc
ttcacctggaccgatctcaacgacatgctgatcagctaccagcctccaaacgccagccac
acacagcgcaggaactatgaggtggagtttgaagtgcatgatttctactttgagaaaagc
cagcctgtgattgtacacgtgtcgatcaggacagctgataccaatgcgccaagagtatcg
tggaacatgggtctcagtctgttggaaggtcagtctcgtccaatcacgtgggatcagttt
cagattgtcgacaatgacaacccgaaggcagtgaagatcatcaccgtagacggcctgcag
cacgggagactatcggttagaggtggaaaaggcttcatgttcactgtaaatgatataaag
gacggcgtggttcgctatcatcacgacgacagcgacacgactaaagattacatcgtcttc
cgcattactgatggcctgcatcaaaccagacacaagttccccatcaacgtcctgcccaaa
gacgacagtccgccattcctcattaccaacatggtgctggagctgtccgagggccagacg
gctcttctgagaggatccgttttgcaagcctgcgatttggactccagtgacgactacatc
atgttcaacatcaccagacctccacaggcaggagaaatcgtgaagatgcccggtcctggc
atcacaggatacaccgtgacccgttttcttcagaaggatctctttcactccatcatctac
tatcggcacgcaggcggtgaggtgttcgatgactcttttgaggtggtgctctctgacttc
catgaccctcctaatctctcagagcctcaggtcgtcgtggttcaaatccagcccgtccct
gatcagcctcctcgggaggcagcgggagtgaccaggcacctgacggtcaatgagaccgac
gtcatctacctgaccaagcagcagctgcactttgtggacttggagtcaccagacagcgag
ctgacgtacaccgtcaccaccccgcctttctacagcaccacctacggaggctctgatgca
ggaaggttgtttctggttgatagcatcccaaaactgaccaaggacccaaatgctccgatg
ctgagactttttactcagcatgcggtcaactacatgaaggtcgcttacatgccccccatc
ttggacattggaccgttccctcagcacgtccaatttgtcctgtcagtgaccaatcagcaa
ggcagcacgaccgctggaatctgcttcaatataacggtcctgccggtggacaacctggca
ccagaggtgcaggtgaagccgctggcggtggatgagggtggagagagctgggtgagtgaa
gaccacatgcgtctgtcagatcaggactctctacaggactctctgcgcgtgaagctgagg
gccggaccccagcatggcagcgtttacctggacggcacagccacgagtccaggccagacg
atcacagtcagggatctgaaaagcctaaaagttagatatcgccacgatggctctgagacc
gaacacgatgctattaagttcatcgccacggacgggataaatgtcgccgattttgtgcta
cgcatcaaagtgacgctcgtcaacgatgaggtgccggtcctcgtggcgggactgaagccc
gttttagtctgcgccgagggacgtgaggtgcccgtcaccatcgagtacatctgtgccacc
gatcctgacagtgacgacagcaccctgatgtacatgatcgcccgacagccgtaccacggg
gtagttcaacgaaacggcatcattgtggaccgcttcattcaggcggatgtaactgctggc
gtaatttcctatagacacacaggacaagagattgggctgcgtcctcgtcacgacgtcgtc
acgtttgtgatctctgatggagaatcggggccggtctcttcctgctgcagtgacagagcc
gcacaaacacctgaagtacagcacgccctgcctgtctatgaccttaacatcaccgtttat
cctgtgaacaaccaacctccatctatagctctcggagaggtgtttatggtggatgagggc
gggtcagcctccgtcacggtcacccatctgagggttgaagaccaagactctgctccagaa
gacctaaacatcattctggttgcgccgccacagttcggatacatagaaaacatcctgccc
agtccagggttcgaaaagagcaacgtgggaatcagtatcgcctctttcacctacagggat
gtgttgaacggacacgttaactatgttcagtctagacaccagaggatggagcccaccacc
gaccagctcatgctgcatgtgtccgacggcaaacaggagtccccttcagtcccgctctac
atcatcatccgtccaaccaatgatgagattccagagctcctggccagaaacatcacggtt
cgggagggagaaatgaaagcgctggactcgtctataatcagtgcggtggatcttgatgtt
cccagagagcgtttaatgttcagcgtagtccagcagcctctgcacggctctgtcatgagc
gtaccgcacgggaatgatgtgactctttacaagagaggatctgagatccctgtggagcac
ttcaccatggatgacctcaggagcggcatgactctgatgtacgcgcacgacgactccgag
agcgaggaggatgcatttattgtccagctctctgacgggaaacaccagctccagaaacac
gtgcgagtcaaagtactgcccgtcaacgacgaggagccgcagattatacggaacagtggg
gttgagatggaggccggggagtcgcggctgatctccggggctgtgctcggcgctcacgac
aaagacactccgtcctctgaaatcatctatgtgtttgagagcgtaccgagtcacggggtc
gttcagatgaaggtaggcacagactgggtgtctctatcggcagggatgaactgctctcag
caggttttggatatgaaccagttacgttaccttcacaccagccgtcccggagcagccgcc
gccgacttctttgcgttccacctgatggatggcaagaaccgctctcctgcgcagcgcttc
cacatcacggtcaaagagctggagaaaggagacatagcgttgttcgtgaagcccgtgagg
acgagtcgcggggagcgtgtgatcctcaccacggacgtcctgctggctgtagacggcact
gacagaccggaggagctgctgtacgtcttcactctacctccagagcatggacacgtggag
tacatcaaacacaccggagtacagatacagtcgttcagtcagctggacatagcagcaaac
ctggtgtgttacgtgcatgacaacagagccacttctcccaaagagaccctgcggtttgtg
gtcagcaacggcatatcgactcgcaacgggaccctggagatcctagtggagatgacagat
aaggttctgcccacgctcgtgcgtaacggtggtctgcgggttcctcagggctccagcatg
actctgagccccgacgcgttactcctgtctgaccctgacagcccacactcctccttgagc
tacaggctgtacgagcctcctcagtacggccagctgctgttgaaggggcagccgctgctc
gccggcagtcatttctcccagcagaacattcaggatctggacgttgcgtacagacactct
ggaggagcttctcagatcgatcgcttcaggttcacagcctctgacagcaccgagagaggc
ttcctgctggacggaaaagtgcagacggagcccgtcttcttcacactgcaaattgaagct
ctagacagcgccgctccgcagatagtagtgctggaaacgctgtggaaagtggagctcctc
aaagatggtcgttatgggatcttcatttcctccagagagctgaaggctcaggatctgagc
tcagtggacgctgatctgatctatcacatcctcagagcaccgtactttgggtacctggaa
aattataccagtggtgagtttgtaaggcagcgtttctctcagaaggatctgaacagaagg
aatattatctacatcataaactctgctctggacgctttaaccgacagtctggagtttgcc
gtttctgattcgctgggaaacaccggagcttctcacaaactggagttcagctgggccagt
gtgcagctgagcaggactgagtacgtaacatgcgagggtcaagggtcagtctcgctgacc
atccagaggaagggaaatgtgcaggactcgtcttatgtgactctacaggtgaaggaacta
acagcatctgccggaaaagactttatagcggcttcatctctgattcagtttgacccaggg
gcggtcagtcgagtgtggaaagtggagatcgttcaggactctctagaggaagccgaggag
acattcgaggttgacttggtctctccggtggctgcggtgctcaaagacaactcaaaagcc
gccgtcttcataaaggacgcgaatgggcagtgcagagagaggcgctttaaagcggaggct
ggtcttcagggccgagaggtgcagccggggccgtaccctcaacacggctccatccaggtg
gagacgttacctttctctcaggggtacatcagaggagacagtgatgtaatagtgcaaact
ccccccgctactaagaaaagactccgagtcatcgggaacgggaaagtggtgcagccctca
gaaaccattcgtcaaggatctgatgtcgtctacagatatcacggtctgacgtcgctggcg
gtggaggaggaccgctcagactcggggtctcacagaaaagctagggttcaggtgaccagc
tggggtcggcagagcaggaccgaaccccagcacgccaacaccagagcggcgcagcgtcct
cgcactcagccgtcctccaaaccctgcgcccggagctcgctggctttctgcattacaacg
agagctcggctcagctgctccgctgcaacggggactcctggaggccctgggcccccgaca
acgagactgcgaaatcgcagaagtgtcctcgaggatggacgtaacgcaacgactactgct
acatgctga
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