Puntigrus tetrazona (Sumatra barb): 122348516
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Entry
122348516 CDS
T08985
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122348516 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122348516 (usp47)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122348516 (usp47)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122348516 (usp47)
Ubiquitin system [BR:
ptet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122348516 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Tra1_central
Motif
Other DBs
NCBI-GeneID:
122348516
NCBI-ProteinID:
XP_043099984
LinkDB
All DBs
Position
7:36598220..36624481
Genome browser
AA seq
1381 aa
AA seq
DB search
MEMVPSEEKQLVPKEGIFWSCRQSIFEEMQKRFSQIESAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTVNKFYEDVALKAGYVNGTFCLAWANTGDMAPLDQASEMSLVLSGFEAGK
RNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERVL
KPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLMYRLKDPSRNAKFLEVEDFPEHIKRLVQREKESEEQEKRQ
REIERNTCKIKLFCMHPVKMMMMENKLEVHKDKTLREATEMAYKLMDLDGVVPLDCCRLV
KYDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQVFQPYKPGEVMVKVH
VVDLKSESIAAPVSVRAYLNQTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNK
TLKAEGFFRSNKVFVESSDSTDHQAVFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLANR
TSCPKASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQQQQQQQQQHQQSSST
SDSQKSSEHSDFEHIESPAQEQDAASQPSQTENCTRAASDTENQFPSEERSDSDVNNDRS
TSSVDSDILSSSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDS
GTDSEYDENGKSKADTQYLYFKAESYSHEDGSGEQKCLLVHVDKRITLAAFKQNLEPFVG
VPSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVND
PEPCKFLLDTVFAKGMTVRQSKEELLPQLKDQCKLDLSIDRFRLRKKTWKNPGTVFLDYH
VYEEDINISSNWEVFLEVLEEPERMKSMSQLAVLTRRWCPAQMKLEAFREVVLESSSVEE
LKEKLSELSGIPLESLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAV
IFYRDSNEELMELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGQ
D
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagggtattttttggagt
tgcaggcagagtatttttgaggagatgcagaagaggttctcacagatcgaaagtgcagcg
gaggagccgagagtgctgtgtatcgtgcaggacaccaccaatgccaagaccgtcaatgag
aggctgacgctcaacctgcccgcctccaccaccgtcaacaaattttacgaggatgtggct
ctcaaggctggatatgtgaacggcactttctgcctggcctgggccaacactggagacatg
gctcctctggaccaggccagtgagatgtccctggtgttgtccggttttgaggcgggaaaa
aggaactttctgcagctcacagacaaggacggggagcagcctcagattgcttcagatgaa
tctggcacggcagacagcagtggtcttgatgacagctctcaggatcgcttcatcggaccc
ttaccacgggatggtactgtcggctgcagcagcgactacagcagccccagttactcctac
tcctctatactgaacaaatcagagacaggttatgttggtttggtcaaccaagcaatgacc
tgttacctgaacagcctcctgcagaccctgttcatgactccggagttcaggaatgcgctc
tacaattgggagtttgaggagtcggaggaggatccggtcaccagtatcccgtaccagctc
cagaggctatttgtgcttcttcagaccagtaaaaagcgtgccatcgagaccactgacgtg
acccgcagctttggctgggacagcagtgaggcctggcagcagcacgacgtccaggagctt
tgcagagtcatgtttgatgcgctagagcagaagtggaaacagaccgagcaggctgacctg
atcaaccagctgtaccagggtaaactgaaggactatgtgcgctgtttggagtgtggctat
gagagctggaggattgacacgtacttggacatccctctggtcatcaggcccttcggggcc
agccaggcttttggcagcgtggaagaagccctgcaagccttcatccagcctgagactctc
gacggtcccaaccaatacttctgtgagcgctgcaaaaagaaatgtgatgcccgcaagggt
ctgagattcctccatttcccatacctgctgactctgcagctgaaacgcttcgactttgat
tacaccactatgcaccgcattaaactcaatgaccgtatgaccttcccagaagagctggac
atgagccccttcatcgacgtcgaggatgagaaatcacctcagacagagagctgcaccgac
agtggggcggagaatgaaggaagctgtcacagtgaccagatgagcaatgatttctccact
gatgatgctgtggatgagggcatctgtctggataacaccagcagcgcagagcgggtgctc
aaaccaaagagctccttgacctttgaactgttctcggtcatggtgcattctgggagtgct
gcaggtgggcactactacgcctgcattaagtccttcagtgacagccagtggtacagcttc
aatgaccagcacgtcagcaagatcacgcaggatgacatccggaagacatatggcggttcc
tcagggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctc
atgtacagactaaaagacccctccaggaatgcaaaattcttggaagtagaggacttccca
gagcacataaagagactggtgcagcgagagaaagagtctgaagaacaagagaagagacaa
agagagattgagcgcaacacatgcaagatcaagctcttctgcatgcatccagtgaagatg
atgatgatggagaataagctggaggttcacaaggacaaaactctgagagaagcaacagaa
atggcatataagctcatggatcttgatggagtggtgccactggactgctgtcgattggtc
aaatacgatgagtttcatgaatatctagaacgttcatacgaaggggaggaagacatgccc
atgggtctgctgctcggcggggtcaagtcttcatacatgtttgacctcctcctggagatc
cgcaggcccgatcaagtgttccagccatacaaacctggagaggtgatggtgaaggtccat
gtggtggatttaaagagcgagtctattgctgcaccagtcagtgtcagggcttatctcaac
cagactattacagagtttaagcaactcattgcacaggccacggggctatgtgcggagacg
atgcgtgtcgtcttagagcgctgctataatgaccttcggcttctttatgtgcccaacaag
actctgaaagcagaaggtttcttcaggagtaacaaggttttcgtggagagctccgattcg
acagatcatcaggccgttttcaccgactctgttttgtggaagctcctggatcgtcacgga
aacacaatcagactgtttgtctccttgcccgagcagtcgccaggctccttggccaacaga
actagttgccccaaagctagcgctgactctgaggactcttttgatggggcgaagggcagc
aggaagtcagtggaagccattcttgaagagagcacagagaagctgaagaacctttcttta
caacaacagcaacagcagcagcaacaacagcagcagcagcatcagcaatcctccagcacc
agtgacagtcagaagagctccgaacacagcgacttcgagcacatcgagtcaccagcacaa
gagcaggacgctgcctcgcagccttcccagacagagaactgcacacgggccgcctccgac
acagagaaccagttcccctctgaggagcgctcggactcagacgtcaataacgaccgcagc
accagctcggtggacagtgacatcctgagctccagccacagcagcgacacgctgtgtaac
gccgacagcggcccgctgcctctggccaacggtctcgactcgcacagcatcaccagcagc
cggcgctccaaagcacacgagggcaagaaggagacgtgggacacggcggaggaggactcg
ggcacagacagcgagtatgatgagaacggcaagagcaaagctgacacccagtacctgtac
ttcaaagcagagtcatactctcacgaggacggatctggagaacagaaatgtttacttgtc
catgttgacaagaggatcacactggcagcatttaaacagaatttagagccatttgttggt
gtcccttccactcagtttaaggtcttccgggtttatgccaacaaccaggagtttgagagt
gtgcggctcaatgagacactctcctctttctctgacgacaataagatcacgattcgattg
gggcgagcgctgaagaaaggagaatacagggtgaaggtgtaccagctgctagttaatgac
ccagagccctgtaagttccttttggacactgtgttcgctaaaggcatgactgttcgacag
tctaaagaggagttgctgcctcaacttaaagaccagtgcaaactggacctcagtatagat
aggtttagactcaggaagaagacctggaagaacccaggcacagtgtttctggattatcac
gtctacgaggaggacatcaacatctccagtaactgggaggtgttcctagaagtccttgaa
gaaccggagaggatgaagtccatgtcccagttggcagttttgacccgtcgctggtgccca
gcccagatgaagctggaggctttccgggaggtggtgctggagagcagcagtgtagaggag
ctcaaggagaagctcagtgaattgagtggaattcctcttgagagcttggagtttgccaag
ggacgaggaacttttccttgtgacatttcagtgttggagatccatcaggatttagactgg
aatcctaaagtctccaccctcaatgtctggccgctctacatctgtgacgatggcgccgtg
atcttctacagggacagcaacgaggagctcatggagctgtctgaggaagagcgcaatgaa
ctgatgaagaaggagagcagccgcttgctgaagacgggccaccgagtcagctactcccca
cgcaaagagaaggccctcaaaatttacttagacggagggcccaccaaagaccccggacag
gactga
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integrated database retrieval system
