Puntigrus tetrazona (Sumatra barb): 122351696
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Entry
122351696 CDS
T08985
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122351696
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Others
Others
122351696
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
122351696
NCBI-ProteinID:
XP_043104891
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Position
1:complement(23772623..23916448)
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AA seq
1240 aa
AA seq
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MERGIRYCRVNAFCALLLVVFAWAPVTETVITCRSCHLLDKWSGRELLVRMDGGVDFGKV
GDKNGDGSTALFNLAGAETGQPDCGAADNCERAHSVRKRNTDRLRSEKTPPDDKWMSMRI
NGKVYNLKHPGSQGSSPGEPHHRVRRSTQGPGSPPGARSPPALGNSTPRAARRVPRSDLR
WNREERRAATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGSV
TESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEG
ATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWSK
LGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQV
STGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSE
AGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDWR
LLQAPSADLRENRIHCMLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAELT
SSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWNK
YSFTSSPLFVDGVLGEPVEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVPWD
LHDQGERCLMGVKRVYRKLKPIARCVMGKTYSVTMISEPCDCTGSDFECDYGFERRADGK
CTPAFWFLPSSVSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAPRGLH
LVTSEGKLTATLANNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYKN
VGIYRVSATAENSLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGTV
TYIWWFGNNSEPVITLEGSVAFTFSREGISVVTVQVSAGNTILQDRKTIAVHEYFRSHLL
AFSSNLDDHNPDVAEWRLDVSRVIKASMMQATGVNPEQLLVTVLPGLPTAAEFFLLPDKQ
LTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHSG
SAMLMLLSVVVVGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEMIQSPVSPTDSTPSCSSQ
RELLTSLEPLDTEPNTQTIECINPHPRVKFSSDLPTYIDV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcagatattgccgggttaatgctttctgcgccctgcttttggttgtg
ttcgcttgggctccggtgaccgaaacagtgataacttgcaggtcatgtcacctgctggat
aagtggagcggtcgggaattattggtgaggatggacggtggtgtcgattttggtaaagtt
ggtgataaaaatggagacgggtcaacggcgctgtttaatttggctggtgctgaaaccggt
caacccgactgcggcgcagcagacaactgcgaacgcgctcactccgtgcgtaaaaggaat
acggaccggctccgttcggagaaaacgccacccgacgataaatggatgtcgatgcgcatt
aacggcaaagtttataacctcaaacatccaggttcacagggttcatcccctggagagccc
catcaccgagtgcgtagaagcacccaaggacccggctcgcccccaggtgcgcgctcgccg
ccggctttgggcaacagcaccccgcgggctgcgcgcagagtcccccgctccgatctgaga
tggaacagggaagagcggagagcggccacatcgcgacaggaggagctgaaacttaccagc
tctacctttgctctgacaggggattccgctcacaaccaagccatggtgcactggtccggc
caaaacagcagcgtcattctcatgctgaccaaactgtatgacttcaatctgggcagcgtc
acagagagctcattatggaggtcaacagattacggaaccacttacgagaaactcaatgaa
aaggtgggagtaaagaccatcctcagctatctatacgtcagccccaacaacaagcgcaag
atcatgctgttgacagatccagaggtggagagcagtttgctcattagctcagatgaagga
gccacctatcaaaaatatcgcctcaacttctacatcctcagcttgctgtttcaccccgag
caggaggactggatccttgcctatggccatgaccagaagctctacagctcagttgagttt
ggccgtcgatggcagctcgttcacgagcgggtggcgcccaatcgattctactggtctaaa
ctgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagagacccag
gctctttatgtcacatgcaagcttcaaaactgcacagacgccaacaagggcaaacctttt
ccaggatacattgaccccaactccctggtggtccaggatgagtatgtgtttgtccaggtg
tcaaccggcggtcggccaatctactacgtgtcatccaggcgagatgtgtttacacccatg
aagcttcccaaatacacccttccaaaggatctgcatgtgatcagtacagatgagaaccga
gttgtggcggcagttcaagagtggaaccagaatgacacttacaacctgtacgtgtcagag
gccggaggcatttactacacgctggctttggagaacgtcatgagcagtatgggaccagag
ggaaatgtcatgatagatctatatgaggtggcaggaataaaaggcatgtttttggctaat
aagaagctaaataatgaggtgaagacatacataacctataacaaaggccgcgactggagg
ctcctgcaagctccttcggctgatctcagagaaaaccgaatccattgcatgctgccgtac
tgttctctgcatctccacctgcacgtatctgcaaacccgtacacatctggaaacatagcc
agcagagaatcggcccctggaatcatagtggcgtcaggttccatcggcgcggagttaacg
agcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagatattt
gatgaagagtacagtgtgctgtacctagatcaaggcggagctttagtggcaattagacac
acccctctacccatcaggcacctctggttgagctttgatgaggggagggtgtggaacaaa
tacagtttcacttcgtcgcctctgttcgtggatggggtcttgggcgaaccggtcgaggaa
acgcttataatgacgatcttcggtcatgtcagtcaccgctcagaatggcagctggtaaag
atagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtgccgtgggat
ttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaagctgaag
cccatagcaaggtgtgttatgggtaaaacctactctgtcaccatgatatccgagccatgt
gactgcactgggtcggactttgagtgcgattacggcttcgagagaagggctgatgggaaa
tgcaccccagcgttctggttcctcccctcctccgtgtctcggacctgtactacagaacac
acattcctcaacagcaccgggtacagaaaggtggtgtctaataactgcaccggaggggtg
atggagcagtacacggctcgtaggcagctgtgccccagccaggcccctcgcggcctccac
ttagtgaccagtgaagggaagctaacagctactcttgccaacaacgtcaccttcctcgtc
ttcctggaggagggcgatggatcgaaaaccagcatcacggtggatttcggcgacggtaat
gctttcacctactccaacgtgagctctatcgaggatggcattaaacacatatacaagaac
gtaggaatctaccgagtgtcagccacggcggagaacagtctgggctcggaaactgtgctc
ctcttcctacacataacatgtcagctggagtctattcacctctccgccccttttgtcgca
gtaaaaaataaagaggtcaatctgacggtggtcctctcaccgagccaagtgggaacggtc
acctatatctggtggtttgggaacaattctgagcccgtgatcacgctggaggggagtgtg
gcgttcacgttctctcgagagggaatcagcgttgtcactgtacaggtgtctgctgggaat
accatcctgcaagacaggaaaaccatcgctgtccacgaatacttcagatctcatcttctt
gccttttcatctaatctggatgatcataaccctgatgtggctgaatggaggcttgatgtg
agtcgagtcattaaagcatctatgatgcaggcgacaggagtgaatccagagcagctgttg
gtcaccgtgttgcccggactgccaacagcagccgagttcttcctgttaccagacaaacag
ctgacagaggggaaaccagacaaaacagccacccatttagaccagctctcagaactggtt
ctcagcgctctgaatcagaatctggttcagttcacactcagacccggagtccagatcaca
gtgtacgctgcccatttatcagcagcgcctctagtggacacaagcgagaatcacagcggc
tcagctatgctcatgctcctctctgtggtggtggtgggtttagccgtgttcctcatctat
aaattcaaaaggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaaagag
caagaaatgatccagagtccagtttctcccactgacagcacacccagctgcagctctcag
agagaactgctcacgtcactggagcctctggacaccgagcccaacacccagaccatcgaa
tgcatcaaccctcatccacgtgtcaaattctcatcagatcttcctacatacatcgacgtt
tga
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