Puntigrus tetrazona (Sumatra barb): 122352772
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Entry
122352772 CDS
T08985
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122352772 (ddx4)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122352772 (ddx4)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122352772 (ddx4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122352772
NCBI-ProteinID:
XP_043106344
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All DBs
Position
10:4209639..4229765
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AA seq
653 aa
AA seq
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MDDWEEDQGPVVSCISGFDVDGSSWKMTAGDGFRGRGGRGGSRGGRGGFRNTFISETDIN
GNDKGWKDGEGQGRGRGGFRGGFRGAFRNGGNEETERRGFERENENGRDEGWKGGEGRGR
GRGGFRGGFREGGDEEKGRKSFGRGGFRGRNEEVFSKVQPDQETAENTGPKVVYVPPPPP
EEESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMAFAEARLCESLTTNVMKSGYVKPT
PVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASKFSEVQEPEAIIVA
PTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNILCGTPGRLLDIIGR
GKVGLSKLRYLVLDEADRMLDMGFEPDMRKLVGSPGMPSKEDRQTLMFSATYPEDIQRMA
ADFLKVDYIFLAVGVVGGACSDVEQTIIQVDQYSKRDQLLEVLRATGNERTMVFVETKRS
ADFIATFLCQEKICTTSIHGDREQREREKALSDFRTGQCPVLVATSVAARGLDIEQVQHV
VNFDLPSSIDEYVHRIGRTGRCGNIGRAVSFFNPESDTPLARSLVKVLSGAQQEVPKWLE
EAAFSAHGTTGFNPRGKVFASTDSRKRGSFKTDEPPQASTPSPAAAADDEEWE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaggaagatcagggccctgttgtatcctgcatttcaggctttgatgtt
gatggcagctcatggaagatgactgctggtgatggattcaggggcagaggaggcagggga
ggatcacgaggaggaaggggaggcttcagaaataccttcatatcggaaactgatataaat
ggcaacgataagggctggaaagatggtgaaggccaagggagaggtcggggtggttttcgc
ggtggttttcgtggtgctttccgtaatggtggtaatgaagagactgagagaagaggcttt
gaaagagaaaatgaaaatggcagagatgagggttggaaaggaggtgaaggccgaggaaga
ggtcgtggaggctttcgtggaggtttccgtgaaggtggtgatgaagagaaaggaagaaaa
agctttggaagaggaggtttcagaggccgaaatgaggaagtgttttccaaggtccagcca
gatcaagaaacagctgaaaatacaggacccaaggttgtgtatgtgccgccgccccctcca
gaagaggagagttccatattttcccattatgccacaggcattaattttgacaaatatgat
gacattcttgtggatgtgagtggcagcaatcctccaaaggctattatggcttttgctgaa
gcaagactttgtgaatcgctgacaacgaatgtaatgaaatctggatatgtgaagcctact
cctgttcagaaacatggaattcccattatttctgctggacgagatctaatggcttgtgcc
cagactggatcaggaaaaacggcggccttcctgttgcccatcctacagcagctgatggct
gatggggtggcagccagtaagttcagtgaggtgcaagagcctgaggccataattgtggcc
cccaccagagagctcatcaatcagatctatctggaggccaggaagtttgcatatgggacc
tgtgtgcgtcctgtggtggtttatggtggtataaatactggatacaccattcgagaggtg
ttaaagggatgcaatattttgtgcgggaccccagggcgattgcttgacataattggtcgt
ggaaaggttggcttaagtaagctgcggtatttggtcctagatgaagccgacagaatgctg
gacatgggctttgagccagatatgcgcaagctggtgggatctccaggaatgccttcaaaa
gaggatcggcaaacactcatgttcagtgccacctaccctgaagatattcaaaggatggct
gcagattttttgaaagtggactacattttcctggctgttggtgtggttggtggagcatgc
agtgatgtggagcaaactatcattcaggtggaccagtactctaagagagaccagctgctc
gaagtgctcagagctacagggaatgaacgcacaatggtctttgttgaaaccaaaagaagt
gctgatttcatagcaacctttctctgtcaggagaaaatctgtactaccagcatccatggt
gatcgggagcagcgagagcgagagaaggctctcagtgattttcgcacaggccagtgtcca
gtgctggtggccacgtctgtcgctgccagaggtctggacattgaacaagtccaacatgtt
gtgaattttgacctgcccagcagcatcgacgagtatgtccatcgcatcggaagaactgga
cgctgtggaaacattggtcgggccgtgtccttctttaacccagagtctgacactccatta
gcccgctctctggtcaaagttctgtcaggggcccaacaggaagttcctaaatggctggag
gaagctgctttcagtgctcatgggacaacaggcttcaacccacgtggaaaagtgtttgcg
tctacagacagtcggaagagagggtcctttaagactgatgaaccacctcaagcttccacc
ccaagcccagcagctgctgcagatgacgaggaatgggaataa
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