Puntigrus tetrazona (Sumatra barb): 122354314
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Entry
122354314 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122354314
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122354314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
HDA2-3
ResIII
AAA_22
PHD_2
DEAD
HMG_box
Motif
Other DBs
NCBI-GeneID:
122354314
NCBI-ProteinID:
XP_043108429
LinkDB
All DBs
Position
11:complement(24295372..24322234)
Genome browser
AA seq
1600 aa
AA seq
DB search
MPGSLSNEDEGQDDVDFEDDVPDEDEEGERRRSVPLSPLERFFSEDDSVKQHKKKKPSKI
MEGKEPKMKKKKKKEGLPSGLDDMSDREDHGHRSGSESSTYSSLKKKKKKPKEKKERKTK
QRKKDDDEDDDDDDDGNLKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPPICIRS
IQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQGGKRKKGSSSEE
DFLDDFSDFDDISIHSASVLSDTSAAPKKKSARRGRKKRKREDGDGYETDHQDYCEVCQQ
GGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEDEVAGEEE
DDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMVRNVCMVRPHK
GMNCFENCAHXNFFFXXXGRDGEKVDGLAKVPLKGRPERQLFVKWAGLSYWHCSWVSELQ
LELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYAAMEERFYRYGIKPE
WMIIHRILNHRYNGPQTSFDKDGDVHYLIKWRDLPYDQCTWETDDFDIPDCDSFKQAYWD
HRDQVLGESHHPLLFRKGKRLKEEGKRREPPPDTPIVDPTIKFEQQQWYIDDTGGTLHPY
QLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIIN
WEREFEMWAPDFYVVTYTGDKDSRAVIRENEFTFEDGTVKSGRKVFRMKKDTPIKFHVLL
TSYELITIDQAILGSIAWACLVVDEAHRLKNNQSKFFRRLNDYKIDHKLLLTGTPLQNNL
EELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK
TELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAS
AEAPKTPSGAYEGAGLTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDYE
GYKYERIDGGITGALRQEAIDRFNAPGACQFCFLLSTRAGGLGINLATADTVIIFDSDWN
PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGS
MSKQELDDILKFGTEELFKDEIEAGDNKDDDSSVIHYDNAAIERLLDRSQDATDDSDMQN
MNEYLSSFKVAQYTVREDDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLG
KGKRVRKQVNYNDAAQEDQEWHADISDNQSEYSVGSEEEDEDFDERPEGRRQSRRQLRNE
KDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAIMRWGMPAQDAFSSQWLVRDLRGKSEKE
FKAYVSLFMRHLCEPVADGSETFADGVPREGLCRQPVLTRIGVMSLVKKKVQEFEHINGK
WSMPELKPEITLDSKKSSRASSPAIKTDTPTPEMSCNNTPCTSKPATPSPPDKIEKSSKE
AEKDECESLTEPEREREKEKAKEGKEGESVESTEHGEVSV
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctaagcaatgaagatgaggggcaagacgatgtggattttgaggacgac
gtgccagatgaggatgaggaaggtgaacgtcggaggagtgttcccctgtcacccttagag
aggttcttctctgaggatgattcggttaaacaacacaagaagaagaaacccagcaagata
atggagggaaaggagcccaaaatgaagaaaaagaagaagaaggagggacttcctagtgga
ctagatgacatgtcagacagagaggatcacggtcacaggtcaggaagtgagagcagcacc
tacagctccctgaagaagaaaaagaagaagcccaaagagaagaaggagaggaaaaccaaa
cagcggaagaaagacgatgatgaggacgatgatgatgacgatgatggaaacttaaaggag
ccaaagtcctccagtcagctgatgcaagagtggggtcttgaagatgtgcagtacgccttt
tcagaggacgactataaaaccatcaccaactacaaagccttcagccagtttcttaggcct
ctcattgccaagaagaaccccaagatccccatgtcaaaaatgatgacggtgcttggagca
aagtggagagagttcagtgcgaacaaccctttcaaaggcacctctgcaactgctgtagcg
gctgccgtagctgctgccgtggaaactgtcaatgtggctccacccatctgtattagaagt
atccaacagatctcaccatctgggccaatcaaaaaagccaaaaccaaagagggaaagggg
cctggtgctaaaaaaaaaagtaagccagtgaaagaaacaaaaaagaaagggaaaccgaag
aagtccaaatcaaaagcaggccagggtggaaaaagaaaaaaaggctcttcgagcgaggag
gatttcctggatgacttttcagactttgatgacatcagcattcacagtgcctctgtactc
tcagacacttcagcggcacccaaaaagaaatcagcccgccgaggacgaaaaaaaagaaaa
agagaggatggagacggctacgagacagaccatcaagattactgcgaggtctgtcagcag
ggaggagagatcattctatgtgacacctgtcccagagcatatcacctggtgtgtctggat
ccagaactggagaaagcccctgagggcaaatggagctgcccccactgtgaaaaagaaggc
attcagtgggaggccaaagatgacgaagaggaggaagacgaggttgctggtgaggaggaa
gatgaccacatggagttctgcagagtgtgtaaggacggaggagagctgctgtgctgtgac
acctgcccttcctcctaccacatccactgtctcaacccaccacttcctgaaattcccaat
ggagaatggctgtgtccacgatgcatggtgagaaacgtctgcatggttcggccacataaa
ggcatgaattgttttgaaaattgtgcacattgaaatttttttttttnnnnnnnnggacga
gatggagagaaggtagacggtttggccaaagtgccgctgaagggtcgtccagagaggcag
ctgtttgtgaaatgggctgggctgtcttactggcactgctcctgggtcagcgaactacag
ttggagctatatcacacagtaatgtaccgtaactatcagcgtaaaaacgacatggacgaa
ccgccaccatacgactatggctctggggaagaggaacttaacagcgagaagaggaggagc
aaagacccccagtatgcagccatggaggaacgattctaccgttacggcatcaagccggag
tggatgatcattcaccggatcctcaaccacaggtacaatggaccacagacaagttttgat
aaggatggcgatgtacactacctgattaagtggagagatttgccatacgatcagtgcacc
tgggagactgatgactttgacatcccagattgtgacagctttaaacaagcctactgggat
cacagggatcaggtgcttggagaaagccatcaccccctgctgttcagaaagggaaagcga
ctcaaagaggaaggaaagaggagagaacctccaccggacactccaattgtggatcctacc
atcaagtttgaacagcagcagtggtacattgatgacacggggggaactttgcacccatac
caactggaaggcctgaactggttgcgattctcttgggcccaaggaaccgacacaatcttg
gctgatgaaatggggcttggcaagactgtgcagactatagtgttcctttactcactctac
aaagagggtcactccaaagggccgtttttggtcagtgcgccgctctccaccatcatcaac
tgggagagagagtttgagatgtgggctccggatttctacgttgtgacttacacgggggac
aaagacagcagggctgtcatacgtgagaatgaatttacctttgaggatggcaccgtcaaa
tcaggacgcaaggttttccgcatgaagaaggacacaccgatcaagtttcatgtcctgttg
acgtcatatgaactcatcaccattgatcaggcaatacttggctccattgcctgggcctgt
ttggttgtggatgaagcccaccgcttgaagaataaccagtcaaagttcttcagaagactc
aacgactacaagatagaccataagctgctgctaacaggaactccactccaaaacaatctg
gaagaacttttccatcttctgaacttcctgacacccaaccgcttcaataatctagagggt
tttctagaggagtttgcagacatctctaaagaggaccagattaagaaactgcatgatctg
ctcggcccacacatgctccggagactcaaagccgacgtgtttaagaacatgccggccaaa
actgagctgattgtccgagtggagctcagccccatgcagaaaaaatactacaagttcatt
ctgacgcgtaatttcgaggcgctgaattctaagggaggaggaaaccaggtgtctctgctc
aacattatgatggacctaaaaaagtgctgcaaccacccctacctcttccccgttgcttct
gccgaagctcccaaaacaccaagtggagcatatgaaggtgcaggtctcactaaggcttct
gggaaactaatgctgctgcagaaaatgctcagaaaactgaaagagcaaggccacagagtg
ctggtgttctctcagatgaccaagatgctggatttgctggaggatttcctggattatgag
ggttataaatatgagcgaattgatggaggcatcactggagctctccgacaggaagccatc
gatagattcaacgctcccggggcgtgtcagttttgttttcttctctctacacgagcgggc
ggtctgggaatcaacttggccaccgcggacactgtcatcatctttgactctgactggaat
cctcacaacgacattcaggcgttcagccgagctcaccgtattggtcaggccaataaggtg
atgatatatcggtttgtgactcgtgcctccgtggaggaacgaatcactcaggtggccaaa
aggaagatgatgctcacgcacctggtggtgcggcccggtctgggctcaaaagctggatcc
atgtctaaacaggagctggacgacatcctcaagtttggcacggaggagcttttcaaggat
gagattgaggcaggggacaataaggatgatgacagcagcgtaattcactacgacaatgcc
gccatcgagcgtttgctagaccgcagccaggacgccacggacgactctgacatgcagaac
atgaacgagtatctaagctccttcaaggtggcccagtacactgtcagagaagatgacaag
atagaggagatagagagagagatcattaagcaggaagagaatgtggatccggattactgg
gagaaactcttgaggcatcactatgaacagcagcaggaagatctggcccgcaatctcggc
aaaggaaagagagtccgcaaacaggtcaactacaatgacgcggctcaggaggaccaagag
tggcatgctgacatttcagataatcaatcagaatactctgtgggttcagaggaggaagat
gaggactttgatgagaggcctgagggtcgcagacagtcacgcaggcagctccgaaacgag
aaggataaaccactgccacccctattggccagagtgggcggcaacattgaggtactgggc
ttcaatacgcgccagagaaaagccttcctgaatgccataatgagatgggggatgccagct
caggacgccttttcttctcagtggctcgtgcgagacctccgcggcaagagtgaaaaagag
ttcaaggcgtacgtgtcgctcttcatgaggcacctctgtgaaccggtggctgacggttca
gagacgttcgccgacggtgtcccgcgcgaggggctctgcaggcagccggttctcacgcgg
ataggggtcatgtctctggtaaaaaagaaggtccaagagtttgagcacattaatgggaaa
tggagcatgcctgaactgaagccagagattaccttggactccaagaaatcttcaagagct
tcttcacctgccattaagacagatactcccacacctgaaatgagctgcaacaacacacct
tgcacctccaaaccagccactccctctccacccgacaagatagaaaagagctcgaaagag
gcagagaaagacgagtgtgaatccctgacagaaccagaaagagagagagagaaggaaaaa
gcaaaagaagggaaggagggggagagtgtggaaagcacagaacatggagaggtaagtgtg
tga
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