Puntigrus tetrazona (Sumatra barb): 122354503
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Entry
122354503 CDS
T08985
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122354503 (chd5)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122354503 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD_2
DEAD
AAA_22
HMG_box
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122354503
NCBI-ProteinID:
XP_043108640
LinkDB
All DBs
Position
11:complement(22799192..22833131)
Genome browser
AA seq
2009 aa
AA seq
DB search
MSPAFFHFNFTLVVFRTKTLKIVSKYIYEDEEGERRRSVPLSPLERFFSEDDSVKQHKKK
KPSKIMEGKEPKMKKKKKKEGLPSGLDDMSDREDHGHRSGSESSTYSSLKKKKKKPKEKK
ERKTKQRKKDDDEDDDDDDDGNLKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNYKAFS
QFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPP
ICIRSIQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQGGKRKKG
SSSEEDFLDDFSDFDDISIHSASVLSDTSAAPKKKSARRGRKKRKREDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEDEV
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWAWSDPPLPPEVPLGRDGEKVDGLAKVPLKGRPERQLFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRRSKDPQYAAMEERFYRYGI
KPEWMIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWETDDFDIPDCDSFKQAYWDHRDQ
VLGESHHPLLFRKGKRLKEEGKRREPPPDTPIVDPTIKFEQQQWYIDDTGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAVIRENEFTFEDGTVKSGRKVFRMKSFSSQKDTPIKFHVL
LTSYELITIDQAILGSIAWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNN
LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA
KTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA
AVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEF
EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW
NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTG
SMSKQELDDILKFGTEELFKDDVEAARAMAGDNKEGEEGSVIHYDDNAISKLLDRSQDAT
EDTEIQNMNEYLSSFKVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQ
SRRQLKSDRDKPLPPLLARVSGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRD
LRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQ
EFEHVNGKFSTPDLIPVGLELKKLTESVSSDPNTPVPASPVPTQPSTPVPSEKTESVSGS
QEDKEITEPESTKSLDPEQQVMPEPSPAPEKSNEGEDQKSASPEGKAMEESEKNDIPSVL
LEPSSNQAQPSSKPSEQSANQTPLDCGKGKETSPERRENKPSPAKIDDKEQKPAIPDDLK
SEDPPENQLNGEKDARDDVDESHRDEKNSIKTRFMFNIADGGFTELHTLWQNEERAAVSS
GKMYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFL
ARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAG
NKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILSRLTSRGNE
PPPQQPFPQGSFGCSQMYNSGFAGGFRGPGGTAMVNYSQMPLGPYVSVSSNGPPAPTSHL
EKKSSDALRDVATPDLKSGKPSDVICIED
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgcattctttcatttcaattttactctggtggtattcagaaccaaaacattg
aaaattgtgtccaaatatatatatgaggatgaggaaggtgaacgtcggaggagtgttccc
ctgtcacccttagagaggttcttctctgaggatgattcggttaaacaacacaagaagaag
aaacccagcaagataatggagggaaaggagcccaaaatgaagaaaaagaagaagaaggag
ggacttcctagtggactagatgacatgtcagacagagaggatcacggtcacaggtcagga
agtgagagcagcacctacagctccctgaagaagaaaaagaagaagcccaaagagaagaag
gagaggaaaaccaaacagcggaagaaagacgatgatgaggacgatgatgatgacgatgat
ggaaacttaaaggagccaaagtcctccagtcagctgatgcaagagtggggtcttgaagat
gtgcagtacgccttttcagaggacgactataaaaccatcaccaactacaaagccttcagc
cagtttcttaggcctctcattgccaagaagaaccccaagatccccatgtcaaaaatgatg
acggtgcttggagcaaagtggagagagttcagtgcgaacaaccctttcaaaggcacctct
gcaactgctgtagcggctgccgtagctgctgccgtggaaactgtcaatgtggctccaccc
atctgtattagaagtatccaacagatctcaccatctgggccaatcaaaaaagccaaaacc
aaagagggaaaggggcctggtgctaaaaaaaaaagtaagccagtgaaagaaacaaaaaag
aaagggaaaccgaagaagtccaaatcaaaagcaggccagggtggaaaaagaaaaaaaggc
tcttcgagcgaggaggatttcctggatgacttttcagactttgatgacatcagcattcac
agtgcctctgtactctcagacacttcagcggcacccaaaaagaaatcagcccgccgagga
cgaaaaaaaagaaaaagagaggatggagacggctacgagacagaccatcaagattactgc
gaggtctgtcagcagggaggagagatcattctatgtgacacctgtcccagagcatatcac
ctggtgtgtctggatccagaactggagaaagcccctgagggcaaatggagctgcccccac
tgtgaaaaagaaggcattcagtgggaggccaaagatgacgaagaggaggaagacgaggtt
gctggtgaggaggaagatgaccacatggagttctgcagagtgtgtaaggacggaggagag
ctgctgtgctgtgacacctgcccttcctcctaccacatccactgtctcaacccaccactt
cctgaaattcccaatggagaatggctgtgtccacgatgcatgtgtcccccgttaaaaggg
aaagtccagaagattctgcactgggcgtggagcgatcctcctctaccacctgaggttcct
cttggacgagatggagagaaggtagacggtttggccaaagtgccgctgaagggtcgtcca
gagaggcagctgtttgtgaaatgggctgggctgtcttactggcactgctcctgggtcagc
gaactacagttggagctatatcacacagtaatgtaccgtaactatcagcgtaaaaacgac
atggacgaaccgccaccatacgactatggctctggggaagaggaacttaacagcgagaag
aggaggagcaaagacccccagtatgcagccatggaggaacgattctaccgttacggcatc
aagccggagtggatgatcattcaccggatcctcaaccacagttttgataaggatggcgat
gtacactacctgattaagtggagagatttgccatacgatcagtgcacctgggagactgat
gactttgacatcccagattgtgacagctttaaacaagcctactgggatcacagggatcag
gtgcttggagaaagccatcaccccctgctgttcagaaagggaaagcgactcaaagaggaa
ggaaagaggagagaacctccaccggacactccaattgtggatcctaccatcaagtttgaa
cagcagcagtggtacattgatgacacggggggaactttgcacccataccaactggaaggc
ctgaactggttgcgattctcttgggcccaaggaaccgacacaatcttggctgatgaaatg
gggcttggcaagactgtgcagactatagtgttcctgtactcactctacaaagagggtcac
tccaaagggccgtttttggtcagtgcgccgctctccaccatcatcaactgggagagagag
tttgagatgtgggctccggatttctatgttgtgacttacacgggggacaaagacagcagg
gctgtcatacgtgagaatgaatttacctttgaggatggcaccgtcaaatcaggacgcaag
gttttccgcatgaagagtttttcatcacagaaggacacaccgatcaagtttcatgtcctg
ttgacgtcatatgaactcatcaccattgatcaggcaatacttggctccattgcctgggcc
tgtttggttgtggatgaagcccaccgcttgaagaataaccagtcaaagtttttcagaatt
ctgaatggctacaaaatctactataagctgctcctgacaggaacccctttgcagaacaat
ctcgaagagctttttcacctgctcaactttctcaccccggagcgcttcaataacctggag
ggctttctggaggaatttgcggacatctcgaaagaggaccagattaagaaactacacgac
ctgttggggccgcacatgctcaggagactgaaggcagacgtgtttaagaacatgccagca
aaaactgagctgatagtgcgagtagagctcagccccatgcagaagaaatactacaagttc
attttaacacggaactttgaggcattgaattctaagggaggagggaaccaggtgtctctt
cttaacatcatgatggacttgaagaaatgctgcaaccatccctacctgtttccagtggct
gcagtggaagctccagtcttacccaatggttcatatgatggcaacctcctggtgaaatcc
tcaggaaaactcaccctgcttcaaaagatgctcaaaaaactgaaagatgaagggcacaga
gttctcatcttctctcagatgacaaagatgctagatctgctagaggacttcctggagttt
gaggggtataaatatgagcgtattgatggtggcattacggggggactgcgacaggaggcc
atcgatcgctttaacgcacccggcgctcagcagttctgttttctgctgtctacacgtgct
ggaggattgggtatcaatctggcaaccgcagacacagtgatcatatatgactctgactgg
aacccacacaatgatattcaggcatttagcagggcacatcgtatcgggcaaaataaaaag
gtgatgatctaccgttttgtaactcgggcatcggtagaggagcgtattacccaggtagcc
aagcgaaagatgatgctaacccatctggtggtgcgtcccggcttgggctctaagacgggc
tccatgtcgaaacaggaactagacgatatccttaagttcggcactgaggagctttttaaa
gatgatgtggaagccgccagagcgatggcaggagataataaagaaggagaggagggcagt
gtgatccactacgacgataacgccatttccaaactgctggaccgtagccaggatgccacc
gaagacacagagatccagaacatgaatgagtacctgagctcattcaaggttgctcagtat
gttgtgagagaggaggatggagaggaggaggtccagagggagattattaagcaggaagag
aatgttgatccagactactgggagaagctcttgaggcaccattatgagcagcagcaggag
gatttggcccggaacctgggcaaagggaaacgtatccgcaaacaggtcaactataatgac
gcctctcaggaggaccaagagtggcaggatgatctttcagataatcaatcggagtactcc
gttgggtccgaggatgaggatgaagattttgaggaacgtcctgaaggaggacgcagacaa
tctcgcagacagttgaagagcgatcgggacaaaccattgccaccgctgctggctagagtt
agtggaaatatagaggttttgggatttaacgcccggcagcggaaagccttcctgaatgcg
attatgcgctggggtatgcccccacaagatgccttcaactctcactggctggtccgtgac
ctgagaggaaaaagcgagaaggagttcagggcttatgtatctctgttcatgaggcacctg
tgtgagccaggggcagacggagcagagacatttgcagatggagtcccgagggaaggccta
tcccgccaacatgttctcacccggatcggtgtcatgtctctggtccgcaagaaggttcag
gagttcgagcatgtgaatgggaagtttagtacaccagatttgattcctgtgggattggag
ctgaaaaaacttactgaaagtgtctcttctgaccccaatacacctgttcctgccagtcct
gttccaactcaacccagcacccctgttccttcagaaaagacagagtcagtgtccggttct
caagaagacaaagagattacagaaccagagagtaccaaatcgctggaccctgagcagcag
gttatgccagaaccgtcccctgcaccagagaaatctaacgagggtgaagatcaaaaaagt
gcaagtccagaaggaaaagcaatggaagagagcgagaagaatgacatcccttctgtcctt
ttagagccatcgtccaatcaagcacagccgtccagtaaacctagtgagcagtcggccaat
cagacacctttagactgtggtaaagggaaagaaacttctccagagagaagggaaaataaa
cccagcccagcaaaaatagatgataaggagcaaaaaccagccattcctgacgatttaaaa
tctgaagacccccctgagaaccaactgaatggtgagaaagacgcgagggatgatgtggat
gagagccacagagatgaaaagaacagcatcaagactcgtttcatgtttaatatcgcagat
ggaggattcacagaattacacacgctgtggcagaacgaggaacgtgcagctgtgtcatct
ggcaaaatgtatgacatctggcaccgtcgccatgactactggctgctagctggcatcgta
acacacggctatgcccgctggcaggacattcagaacgaccctcgctacgccatcctcaac
gagcctttcaagactgaaatgcacaaagggaactacttagaaatgaagaataaatttctt
gcccgacgttttaagctcctggaacaggcgttggtaattgaggagcagcttcggcgagcg
gcgtacctgaatatgactcaggatcccagtcaccccgccatggccctcaacacacgcttc
gcagaggtggagtgcctggctgagtcccatcagcacctctccaaagagtcactggctggt
aacaagccagccaatgctgtgctgcacaaagtgttgaatcagctggaggagctgttaagt
gatatgaaggctgatgtgacgcggttgccctccatgctttcgcgggtcccacccgtatcc
gcccggctccagatgtcagagcggggcatcctcagcagactcaccagccggggcaacgag
ccgccacctcagcagcctttccctcagggctctttcggctgttctcaaatgtataatagt
ggtttcgccggagggttccgtggacctggaggcaccgcgatggtgaactacagccagatg
cccctggggccgtatgtcagcgtgtcctcaaatggacctccggctccaaccagccaccta
gaaaagaagtccagtgatgctctgcgagatgtggccacccctgatttaaaatcaggcaaa
cctagcgatgttatatgcattgaggactag
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integrated database retrieval system
