Puntigrus tetrazona (Sumatra barb): 122356232
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Entry
122356232 CDS
T08985
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122356232 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122356232 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122356232 (srsf5a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
SR proteins
122356232 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
SET_assoc
OB_RNB
QWRF
Motif
Other DBs
NCBI-GeneID:
122356232
NCBI-ProteinID:
XP_043110697
LinkDB
All DBs
Position
13:complement(14160661..14164414)
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AA seq
259 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRKSRSGGSRYGPPVRTEHRIIVENL
SSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLK
LYEDRKRDRSRSRSRSRSSSRSRSPSRSRTPERGSKRSRSRSISRTPEKKSTSNRSPSRS
PSPPRKQSRSRSPSAESQH
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtattcatcggccgtctgagccctcatgctcgtgaaagagacgtg
gagaagttctttaaaggctacggacgcattcgggagattaacctgaaaaacgggtttggc
ttcgtggagtttgatgaccacagggacgctgatgatgcagtgtatgagctgaatggaaaa
gagctgtgcagtgagagggtgaccattgaacatgctcgctctcgccgtggaagaggcggt
ggcccaggaatgggaggacgtttctctccacgatttggaggatatcgtaaatcccgcagt
gggggttccaggtatggaccacccgtgcgaacggagcacagaatcattgtagagaatctc
tcctctcgcatcagctggcaggatctgaaggacttgatgaggaaggtgggagaagtgacc
tttgtggatgcacacaggaccaagaagaatgagggagttgtggagtttgcttcacacagt
gatatgaagaatgccattgagaagctggatggaacagatctgaatggacggaaactcaag
ttgtacgaggatcgcaagagggatcgtagtagaagccgttcccgcagcaggagcagctcc
cgctcccgatcgcctagtcggagtcgcacccctgagcgtggaagcaagcgctctcgcagt
cggtcaatcagtcgcaccccagagaagaagagtaccagcaaccggtctccttcccgatct
ccatctcccccgaggaaacagagccgctctcgatctccttctgcagagagtcagcactga
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integrated database retrieval system
