Puntigrus tetrazona (Sumatra barb): 122356332
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Entry
122356332 CDS
T08985
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122356332 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122356332 (srfb)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
122356332 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
122356332
NCBI-ProteinID:
XP_043110833
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Position
13:complement(22157665..22183174)
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AA seq
519 aa
AA seq
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MLSSQTAAALSGSGSAAGKSAGHGAVVMGAGVRAGFARGLGPMGLGIPGRFEPDKEGPPH
LCSGSDADSDSGDEDELLGSVGDNRRGGGVKRERAEMEAAIVGPEAGLPSAALAAGATGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SLGETKDALKPSFTVASVPGSSTVPSSSSSPSFPITNYLPPVSGSGAKSTGAPGGVMQLP
AGFTFMSGSPFAPGTPAIPLGQLQQHSLAGQSITAPGSGSSQGQQGQQAVFRLPATVSLA
GGAMPQQLQTVQVQSSSQSSCISTSTSSPEISQSSTASTAAVSLQPATIVTSSVPTSMTG
HMMYPSTHTLMYASAPTLADGSVAVLNAFTQGPVSHTPTQDTGGVPQVFLTAPPGTVQIP
VSAVQLHPMVIGQQSSGSSSSLTELQVVSLDASQNAKID
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttatccagccagaccgcagcggctctgagtggaagcggatcagcggcggggaagagc
gcaggccacggcgcggtggtgatgggcgccggggtccgtgcggggttcgctcgggggctg
gggccgatggggctcgggatcccagggaggttcgagccggataaagagggacccccgcac
ctctgcagcggctccgacgcggactccgactccggcgatgaggacgagctcttggggtca
gtcggggacaaccggaggggaggcggcgtcaagcgggagagagcagagatggaagccgcg
attgtgggacccgaggccggcttgccttccgcggcgctcgcggctggagcgactggagcg
aaaccgggcaagaagacccgcggaagagtgaagataaagatggagtttatagacaacaaa
ctgcgtcggtacacgaccttcagcaagaggaagacgggcatcatgaagaaggcgtacgag
ctctccacgctcacagggactcaggttcttctgctggtggccagcgagacgggacacgtc
tacaccttcgccactcgtaagctgcagcccatgatcaccagcgagacgggcaaagctctg
atccagacctgtctgaactctccagactctccgcctcgctccgacccgtccacggaccag
cgcatgagcgccacgggcttcgaggagaccgacctcacctaccaggtgtctgagtccgag
agcctcggagaaaccaaggacgctctgaagccgtccttcaccgtggccagtgtcccgggc
agcagcaccgtccccagctcgtccagcagcccgtccttccccatcaccaactacctgccg
ccggtcagcgggagcggagccaagagcaccggggcccctggaggagtcatgcagctgccc
gccggcttcaccttcatgtcaggctctccgtttgctcccgggactcctgcgattcctctg
ggtcagctgcagcagcactctctggccggtcagagcatcacggccccggggtccggctcg
tctcagggtcagcagggtcagcaggctgtgttccgtctgccggccaccgtctcgctcgcc
ggcggagcgatgccgcagcagctccagaccgtccaggtccagtccagcagtcagtcgagc
tgcatcagcaccagcaccagcagtccagagatctctcagagcagcacggcgtccacagct
gcggtcagtctgcagccggccaccatcgtcacctcctcagtgcccacctccatgaccggt
cacatgatgtaccccagcacacacacactcatgtacgcatccgcacccacgctagcagac
gggagcgtagcggtgctcaacgccttcacacagggaccggtgtcacacacaccgactcag
gacacaggtggcgttcctcaggtgtttctcacagctcctcccggtacggttcagattccc
gtctcggcggtgcagcttcatccaatggtgattggtcagcagtccagcggcagcagcagt
agtctgaccgagcttcaggtcgtcagtctggacgcctcccagaacgccaagatcgactga
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