Puntigrus tetrazona (Sumatra barb): 122357818
Help
Entry
122357818 CDS
T08985
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122357818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122357818
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-60S particles
RNases
122357818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
122357818
NCBI-ProteinID:
XP_043113383
LinkDB
All DBs
Position
1:complement(29284247..29289493)
Genome browser
AA seq
768 aa
AA seq
DB search
MKSGTRSAEGQMDSSSSSSSSCRKRKAVDSLTSESQEKRERLELTAQDVLSVKDVCDLIH
YITLRRSHSVRKPSWFSEVDERVTRVNVMFLDGLTQSHFYRYFSLFRHLRNKYSARWTLA
PCSSDLLTSDLSREVTVCDSAAEALPAVVRWHPVIRRFGLSSSGLSHFLLTQEEMIKQKY
PVKGGQGCEGFVCTVSAGLVTDSSPLFGLDCEMCVTCAGSEVTRVALVDSSGCCVLDELV
KPPNPIIDYCTRFSGITRALLEPVSTRLADVQSRLLKLLPPDAVLVGHSLDGDLRVLQLV
HPHVVDTSLLYRQEFGRRFKLKHLAQVILKQEIQSEVRKGHDPCEDALAALHLAQYFIRK
GPRETSSSECSPAMLNHVLSQVLEDHLEDLWGLNCSKKNHVISSNHHSSPLCFGHALSTS
GQSAVFLGGSVKTSDSLSNQQRLQCSSDREVVCVFRRIVQLYTLSVLQFSSFRNTLNQTA
AVGSHLKQVCERLQQMCVLYVGPFPSDTTETLVHTLLKRWGPLRNLRLLHYTHEVHAEVV
FKHLEGAQLALEHLNGYQINDCIIEVRRPVDESCLDLKKRLSERQGDPLNANVIYVSNLS
CKPPRHEHQLQTFRQFGPIQSVTSAAEHAGKRGGHAFIEFERADSAQAALGVALQTGNRK
LSACHALTPPHMTSWTRPVTKDTSPGRTEPGEECDERLLEQQMKKLDTRVGKVFRALEEN
CLSIVILPGDRIDAVDHPGLCFIHIKHSHDTPPTVCSASSQLICDWPT
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtggaactcgatcagctgaaggacagatggactcatcctcatcctcctcatcc
tcgtgccgtaagaggaaggctgtggacagtctgacctcagagtctcaggagaagagagag
agactggagctcactgcacaggatgtgctgtcggtgaaggacgtgtgtgatctaatccac
tacatcacactcagacgctcacacagtgtgaggaagcccagctggttcagtgaggtggat
gagcgggtgactcgtgtgaacgtgatgtttctggatggactgacacagagtcacttctac
agatacttcagtctcttcagacacctgagaaacaaatacagcgcaaggtggactctggct
ccctgctcgagtgacctgctgacctctgacctcagccgtgaggtcaccgtgtgtgacagc
gcagcagaggcgctaccagctgtggtgaggtggcatcctgtgattcgccgcttcggtctg
agctccagtgggctgagccacttcctgctgacccaagaagaaatgatcaaacagaagtat
cctgtaaagggtggtcagggctgtgaggggtttgtgtgtacggtgagcgccggcctcgtg
acggacagcagcccgctcttcggtctggactgtgagatgtgtgtgacatgtgcggggtca
gaggtcacgcgcgtggcactggtggacagcagtggatgctgtgtgctggatgagctcgtc
aaaccacccaacccaatcatcgactactgcaccaggttctcaggaatcacgagagccctg
ctcgagcccgtctccacgcgtctagctgatgttcagtccagactgctgaagctgctgccg
ccggacgccgtgctggtcggtcactctctggacggagacctgcgagtcttacagctggtt
catcctcacgtcgtggacacgtctctgctctaccggcaggagtttggccgcaggttcaag
ctcaaacacctggctcaggtcattctgaagcaggagattcagtcggaggtcaggaaaggt
catgacccctgtgaggatgcactggctgctcttcatctggctcagtacttcatcaggaag
ggacccagagagaccagttcttctgaatgttctccagcgatgttgaatcatgttctctct
caggttctggaggatcatctggaggatctgtggggtctgaactgttctaagaagaatcac
gtgatctcgtccaatcatcacagcagccctctctgcttcggccacgccctcagcacgtcc
ggccaatcagcagtgtttctgggcggatcggtgaagacgagcgactctctgtccaatcag
cagagactccagtgctcgagtgacagagaggtggtgtgtgtgttcagacggatagttcag
ctgtacacactcagtgttcttcagttctcttcattcagaaacacactgaatcagacggca
gcggtgggatcacacctgaagcaggtgtgtgagcgtctgcagcagatgtgtgtgttgtat
gtgggtccgtttccgtctgacaccacagagactctcgtacacacactcctgaagcgctgg
ggacccctgaggaacctacgactgctgcactacacacacgaggttcatgctgaggtggtg
tttaagcatcttgaaggagctcagcttgctctagaacatctgaatgggtaccagatcaac
gactgcatcatcgaggtgcggcgtcccgttgacgagtcgtgtctggatctgaagaagcgt
ctctccgagcgtcagggcgatcctctcaacgctaacgtcatctacgtgagcaatctgtcc
tgcaaaccgcctcgccatgaacaccagctgcagaccttcagacagtttggccccattcag
agcgtcacgagcgccgcagagcatgctgggaaacgcggcggacacgccttcatcgagttc
gagcgagcggacagcgctcaggccgcgttgggcgtcgccctccagacaggaaacaggaag
ctgtcggcgtgtcacgctctgaccccgccccacatgacctcatggacacgccccgttacc
aaggataccagcccaggcaggacagagccgggggaggagtgtgacgagcgactgctggag
cagcagatgaagaaactggatacaagagtgggaaaggtgttcagagcgctggaggaaaac
tgcctgagcatcgtcatcctccccggagacaggatcgacgccgtcgatcatccaggcctc
tgcttcattcacatcaaacacagccacgacacacccccgactgtctgctccgcctcctcc
cagctgatctgtgattggccgacctga
DBGET
integrated database retrieval system
