Puntigrus tetrazona (Sumatra barb): 122358088
Help
Entry
122358088 CDS
T08985
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
ptet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122358088 (syvn1)
04120 Ubiquitin mediated proteolysis
122358088 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122358088 (syvn1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122358088 (syvn1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122358088 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122358088
NCBI-ProteinID:
XP_043113798
LinkDB
All DBs
Position
14:18302702..18310305
Genome browser
AA seq
620 aa
AA seq
DB search
MVRAALVTATSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAPANAP
IPPPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAAPGAQAAPDAPQTSTAATQAQGAESGA
SSSTQPNADGASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSESNAGEASTSV
NAESSSSAGNTETPSQENEAQSDGSVNGATGFSPPDSTTAADKDRKEGDEDEDDGEPNAA
ELRRRRLRKLETALENAPDH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtgacagccaccagtctggtgctgacgggagcagtggtcgct
catgcctacttcctcaagcaccagttctacccgactgtggtatacctcactaaaagcagc
cctagcatggcggttttatacatccaggctttcgtcttggttttccttttggggaaatta
atgcgcaaggtgtttttcgggcaactgagagctgccgaaatggagcatctgattgaacgc
tcctggtatgcggtgaccgagacctgtttagcctttacagtcttcagggatgatttctct
cctcgttttgtggcccttttcactttgctgcttttcctcaagtgcttccactggctggct
gaagacagggtggactttatggaaaggagtccaaatatctcctgggtcttccacttcaga
gttctctctctaatggtgttgctgggagtgttagacttcctgtttgtcaatcacgcgtgt
cacagcatcataaccagaggagcttcagtccagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctgaccaccttcatcaagtacaccttacacacaattgatctgcag
agtgagaacccgtgggacaataaggccgtctacatgctgtacacagagctcttcacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgatcaaagtgcacaccttc
cctctgtttgccatccgacccatgtatctcgcaatgaggcaattcaagaaggcagtgaca
gacgccatcatgtctcgacgagccattcgtaacatgaatactctctacccagatgccacc
cctgaagacttgcaagccacagacaacgtgtgcatcatctgcagagaggagatggtgact
ggagccaagaagctgccttgcaaccacatctttcactcgagttgccttcgctcatggttt
caaagacagcagacgtgtccgacctgtcgtatggatgtcctccgagcgtcccagccaaac
cagactcctgccccagctcctgcgcaggcacccgcccctgctgcccctgctaatgccccc
atacctccacccgtcaatgtcgctccaggtatgatgcctcagtttcccccgggtctgttt
cccttttggggtcccttcccaggcgcgcctcctcctgctgctccgggtgcgcaggcggct
cctgacgctccgcagaccagcaccgctgcgacacaggcccagggagcagagtccggagcc
agcagctcgacccagccaaacgcagacggggcctctgctgctcccggagcaatgccggga
ttccctttctccatgcctccacctttcccatcagctccatggctgccaatgcctccccct
ccacccttcatgtcctccatgccgccgccgccatcgactctgtccacgatgtccgaggcc
gagctcagagagctggagcaggagggcaggcgaggtctggaagccaggctgcagtgcctt
cacaacatccacacgctgctggacgccgccatgctcaacatccaccactacctcagcacg
gtggcgacgttaagccctccaagatcagaaagcaacgctggcgaggcgagtacatcggtg
aacgcggagtcctcttcctccgcgggcaacacggaaactcccagtcaggagaacgaggct
cagagcgatggatccgtaaatggagccacgggcttctctccaccagactcgaccacagcg
gcggacaaagacaggaaggaaggagatgaagacgaggacgacggtgagcccaatgccgcc
gagttgagacgacgtcgcctgcgtaaactggagaccgctctggagaacgctcctgaccac
tga
DBGET
integrated database retrieval system
