Puntigrus tetrazona (Sumatra barb): 122359449
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Entry
122359449 CDS
T08985
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122359449 (tyw1)
Enzymes [BR:
ptet01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
122359449 (tyw1)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122359449 (tyw1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Transketolase_C
Flavodoxin_5
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
122359449
NCBI-ProteinID:
XP_043115690
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Position
15:complement(10034152..10081728)
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AA seq
750 aa
AA seq
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MLFLAVISCLLCCTVGADMSGALRDVWDFTESYLLTVWQNRLYVYTTAAVFIGVWFTLNV
LLKKKKMVDPASPLLHKTAKKQELSPETEKVVHVSGVKVFYGSQTGTAKGFAKELAGDVS
AQGIQCEVVDMKEFDPEDTLAEECTSKVICVFLVATYTDGQPTESAEWFCKWLEEASTDF
RYGKTYLKGMRYAVFGLGNSVYVGHYNTVGKNVDKWLWMLSAARIMTRGEGDSNVVKSRH
GSVQADFQAWKTKFLNRLQALAKGEKKACSGKCKNGSCKNKKKHKEEAEDSQSLAEKNNS
EEELMESSSDEESSAEEDKSHGSVIDMEDLGNVMNRMKKAKRMEGDEEDSQRVKLSKQNG
VRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRG
VPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQNISSFLVTNAQFPEEIRS
LVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLRALGEKQQRTVYRLTLVKAWNV
DELKAYADLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVIYFVQQLANLLPDYE
IACEHEHSNCLLLAHHKFKVDGEWWTWIDYERFQELIEEYEESGGTKNFSAMDYMAKTPS
WAIFGARERGFDPTDIRFQRKNKTKDITGC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttagccgtgatatcgtgtttgctgtgttgtacagtcggcgctgacatgtca
ggcgctttgagagatgtttgggatttcactgagagctacctgctgactgtgtggcagaac
aggttatatgtgtacactactgctgctgttttcataggagtctggtttactctcaacgtg
cttctcaaaaagaagaaaatggtcgaccctgcgagtcctcttcttcataaaactgcgaag
aagcaagaactttcgcccgaaacggaaaaagtcgttcatgtttcaggggtcaaagtgttt
tatggatcacagacgggaaccgcaaagggtttcgcaaaagagcttgctggagacgtcagt
gctcaggggatccagtgtgaggttgtagatatgaaggagtttgacccggaggacacactg
gctgaggagtgcacaagcaaggtgatctgcgtgttcctggttgccacatacacagacggg
cagcccactgagagtgccgaatggttctgtaaatggcttgaagaagcttccacagacttc
cgttacgggaaaacctacctgaagggaatgagatacgccgtctttgggcttgggaactcc
gtttacgtcggccattacaacactgtcggtaagaacgtagataagtggctgtggatgctg
agcgctgcccggatcatgaccagaggagaaggcgactccaacgttgtgaagagccgacac
ggcagcgtgcaggctgacttccaggcctggaaaaccaagttcttgaaccggctgcaggcc
ctggccaagggtgagaagaaagcctgctctggcaagtgcaagaacggcagctgcaagaat
aagaagaaacataaggaggaggcagaggacagccagtcgctcgctgagaagaacaactcg
gaggaggagctgatggagtccagcagtgacgaagagtcctccgctgaggaagacaagtct
cacggctccgtcatcgacatggaggaccttgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagaggactcccagagggtgaagctgtcaaagcagaatgga
gtgaggaagagcgagtcagaggaggagcggagagagatgatcactccagccttgagagat
gctctgactaaacaaggatacaaactaataggaagtcactctggggtaaaactgtgtcgt
tggaccaagtcaatgctaagaggaagaggaggctgctataaacacaccttctatgggatt
gaatcacaccgctgtatggagaccacgccgagcctggcctgtgccaacaaatgtgttttc
tgctggagacaccacaccaacccggtgggcaccgagtggcgctggaaaatggacccggcc
gagaagatcattcaagaggctgtggagaaccacaggaacatgattcgccagttcagaggt
gttccaggagtgcgtcccgagcgctttgaagagggcctcactgtgaagcactgtgctctg
tctctggtgggtgagccaatcatgtatcctgagatcaattccttccttcgactacttcac
cagcagaacatatccagcttcctggtcacaaacgcccagttccctgaggagatcaggagt
cttgtgcctgttacacaactttacgtcagcgttgatgccagcactaaggatagtttgaag
aaaattgaccgtcccctcttcaaagacttctggcagcgcttcttggacagtctcagagcg
cttggtgaaaagcaacagcgcacggtgtacagactgaccctggtgaaggcctggaatgtg
gatgagctgaaggcctacgcagatctcatcgcccttggacagccagatttcatcgaggtc
aagggagtgacatactgtggagagagctcagccagtagcctgacaatggccaacgtaccc
tggcacgaggaggtcatctacttcgtgcagcagcttgccaacctgctcccagactatgaa
attgcctgcgaacacgagcactccaactgtcttttactcgcacaccacaagttcaaagtc
gatggggaatggtggacatggattgactacgaacgcttccaggagctcattgaggaatac
gaggagagcgggggcaccaagaacttctcagcgatggactatatggctaagacccccagc
tgggctatttttggggcccgagagaggggatttgaccccacggacatacgcttccagaga
aagaataagaccaaggatatcacagggtgctga
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