Puntigrus tetrazona (Sumatra barb): 122360569
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Entry
122360569 CDS
T08985
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122360569
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122360569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
U-box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
Prok-RING_4
ATG17_like
IFT57
KxDL
Sina_RING
zf-Nse
Prominin
NPV_P10
CENP-Q
zf-RING_6
Fib_alpha
PFam54_60
CorA
Exonuc_VII_L
zf-RING_10
Prefoldin_3
UnbV_ASPIC
zf-RING_4
DUF4200
zf-UDP
DUF4988
Med9
Syntaxin-6_N
End3
Wtap
Motif
Other DBs
NCBI-GeneID:
122360569
NCBI-ProteinID:
XP_043117229
LinkDB
All DBs
Position
16:4895908..4905553
Genome browser
AA seq
467 aa
AA seq
DB search
MSCLSQISEDDLLCPVCYDIFTDPVLLLCSHSVCRACLEEFWSSRGFQECPVCRKKFTAC
EPPANLALRNVCETFIQNRSSSSPEALCDAHGEKARLFCLDDERLVCLVCRDSEKHLQHT
FRPVDEVAPLLKEELKAAVKDLEEKLESFKEIKQTLDDASRHIKAQTQQTVRCLQEEFER
LHRFLREEEMIRISALIEEENQKSRMMKERIEQIDREIESLSNNIGTIKNDLDAANMLFL
QNVKLSKERAQVTPDDPAMPAGALLNVSKYLRNLKFEVWKKMMQIVQLAPVTLDPNTAHP
LLFLTDDLTHVKSSADGQQYPDNPERFDFYQCVLGSEGFTSGTHFWDVEVLNNTCWSVGV
TTASNRRKGGSFFDTGVWRVRYMAGQYTSQSAFMPRVHLALDKQLKVIRVQLDWDAGKVS
FSDPLTNTHLCTFTTTFNEAIYPFLYNSCTDFPLRILPVKLSIEVVS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcctgagtcaaatctccgaggatgacctgctgtgtcccgtgtgctacgacatc
ttcaccgatcccgtgcttctgttatgcagccacagcgtctgcagagcttgtctggaagag
ttctggagctccagaggctttcaggagtgcccggtgtgccggaaaaaattcacggcgtgt
gaaccgcccgccaacctcgcgctgaggaacgtgtgcgagacgttcatccagaacagaagc
tcctcttcacccgaggcgctctgtgacgcgcacggagagaaagcccggctcttctgtctg
gatgacgagcgtctcgtgtgtttggtgtgcagagattcagagaaacacctgcagcacacc
ttcagacctgtcgatgaagtcgcgccgcttctaaaggaggagttgaaagctgcggtgaaa
gatttagaagaaaaactcgagagctttaaagaaataaaacaaacactcgacgatgcgtca
cgacacattaaggcccagactcagcagaccgtgagatgcctgcaggaggagtttgagagg
cttcatcggtttcttcgagaagaggagatgatcagaatatctgcactgatagaggaagag
aatcagaagagtcggatgatgaaggagaggattgaacaaatagacagagagatcgaatct
ctatcaaacaatattggaaccataaaaaatgatttagatgctgccaacatgctctttctg
caaaacgtcaagctctcaaaagaaagagctcaggtcacgccggacgatccagcgatgccc
gcgggggccttgctgaatgtgtcaaaatacctgaggaacctgaagtttgaagtctggaag
aagatgatgcagatagttcagctcgctcctgtcacactggaccccaatacggcacatcct
ctgctgttcctgaccgatgatctgacccatgtgaaatccagcgctgacggacaacagtat
ccagacaacccagagaggtttgacttttatcagtgcgtgctgggctctgagggctttacc
tctggaactcacttctgggacgtggaggtcctgaacaacacgtgctggtctgttggagta
accacagcatctaaccggagaaaaggaggtagtttctttgacaccggagtgtggcgcgtg
cgctacatggccggtcagtacacatcacagtcagcgttcatgcctcgcgtgcatttagct
cttgataaacagctgaaggtgatcagagttcagctggactgggacgcaggaaaggtttcg
ttctccgatcctcttactaacacacatctgtgcactttcaccactacatttaatgaagca
atctatccatttctctataacagctgtacagatttcccgctcagaatcttacccgtgaaa
ctcagtattgaagtggtatcctaa
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