KEGG   Puntigrus tetrazona (Sumatra barb): 122360569
Entry
122360569         CDS       T08985                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptet04121]
    122360569
Ubiquitin system [BR:ptet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122360569
SSDB
Motif
Pfam: PRY zf-B_box SPRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 U-box zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 zf-RING_5 Prok-RING_4 ATG17_like IFT57 KxDL Sina_RING zf-Nse Prominin NPV_P10 CENP-Q zf-RING_6 Fib_alpha PFam54_60 CorA Exonuc_VII_L zf-RING_10 Prefoldin_3 UnbV_ASPIC zf-RING_4 DUF4200 zf-UDP DUF4988 Med9 Syntaxin-6_N End3 Wtap
Other DBs
NCBI-GeneID: 122360569
NCBI-ProteinID: XP_043117229
LinkDB
Position
16:4895908..4905553
AA seq 467 aa
MSCLSQISEDDLLCPVCYDIFTDPVLLLCSHSVCRACLEEFWSSRGFQECPVCRKKFTAC
EPPANLALRNVCETFIQNRSSSSPEALCDAHGEKARLFCLDDERLVCLVCRDSEKHLQHT
FRPVDEVAPLLKEELKAAVKDLEEKLESFKEIKQTLDDASRHIKAQTQQTVRCLQEEFER
LHRFLREEEMIRISALIEEENQKSRMMKERIEQIDREIESLSNNIGTIKNDLDAANMLFL
QNVKLSKERAQVTPDDPAMPAGALLNVSKYLRNLKFEVWKKMMQIVQLAPVTLDPNTAHP
LLFLTDDLTHVKSSADGQQYPDNPERFDFYQCVLGSEGFTSGTHFWDVEVLNNTCWSVGV
TTASNRRKGGSFFDTGVWRVRYMAGQYTSQSAFMPRVHLALDKQLKVIRVQLDWDAGKVS
FSDPLTNTHLCTFTTTFNEAIYPFLYNSCTDFPLRILPVKLSIEVVS
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagttgcctgagtcaaatctccgaggatgacctgctgtgtcccgtgtgctacgacatc
ttcaccgatcccgtgcttctgttatgcagccacagcgtctgcagagcttgtctggaagag
ttctggagctccagaggctttcaggagtgcccggtgtgccggaaaaaattcacggcgtgt
gaaccgcccgccaacctcgcgctgaggaacgtgtgcgagacgttcatccagaacagaagc
tcctcttcacccgaggcgctctgtgacgcgcacggagagaaagcccggctcttctgtctg
gatgacgagcgtctcgtgtgtttggtgtgcagagattcagagaaacacctgcagcacacc
ttcagacctgtcgatgaagtcgcgccgcttctaaaggaggagttgaaagctgcggtgaaa
gatttagaagaaaaactcgagagctttaaagaaataaaacaaacactcgacgatgcgtca
cgacacattaaggcccagactcagcagaccgtgagatgcctgcaggaggagtttgagagg
cttcatcggtttcttcgagaagaggagatgatcagaatatctgcactgatagaggaagag
aatcagaagagtcggatgatgaaggagaggattgaacaaatagacagagagatcgaatct
ctatcaaacaatattggaaccataaaaaatgatttagatgctgccaacatgctctttctg
caaaacgtcaagctctcaaaagaaagagctcaggtcacgccggacgatccagcgatgccc
gcgggggccttgctgaatgtgtcaaaatacctgaggaacctgaagtttgaagtctggaag
aagatgatgcagatagttcagctcgctcctgtcacactggaccccaatacggcacatcct
ctgctgttcctgaccgatgatctgacccatgtgaaatccagcgctgacggacaacagtat
ccagacaacccagagaggtttgacttttatcagtgcgtgctgggctctgagggctttacc
tctggaactcacttctgggacgtggaggtcctgaacaacacgtgctggtctgttggagta
accacagcatctaaccggagaaaaggaggtagtttctttgacaccggagtgtggcgcgtg
cgctacatggccggtcagtacacatcacagtcagcgttcatgcctcgcgtgcatttagct
cttgataaacagctgaaggtgatcagagttcagctggactgggacgcaggaaaggtttcg
ttctccgatcctcttactaacacacatctgtgcactttcaccactacatttaatgaagca
atctatccatttctctataacagctgtacagatttcccgctcagaatcttacccgtgaaa
ctcagtattgaagtggtatcctaa

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