Puntigrus tetrazona (Sumatra barb): 122362345
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Entry
122362345 CDS
T08985
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122362345 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptet03051
]
122362345 (psmc1a)
Proteasome [BR:
ptet03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122362345 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_25
AAA_28
AAA_3
AAA_14
ATPase
RNA_helicase
Prot_ATP_ID_OB_N
AAA_18
TIP49
NB-ARC
AAA_33
IstB_IS21
NACHT
Mg_chelatase
Zeta_toxin
Parvo_NS1
AAA_7
SLFN-g3_helicase
AAA_24
Motif
Other DBs
NCBI-GeneID:
122362345
NCBI-ProteinID:
XP_043119710
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All DBs
Position
17:2019781..2024366
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AA seq
440 aa
AA seq
DB search
MGQSQSGGQGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKVKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacaaggacctggtggaggaaagaaagatgacaaagat
aagaaaaagaagtacgagcctcccattcccacacgagttgggaaaaggaagaagaaagta
aagggaccagatgctgctagcaaactccctctggtcactccgcacacgcagtgcagactg
aaactcctcaaacaagagagaattaaagactatctgctgatggaggaggagttcatcagg
aaccaggagcagatgaaacccctggaggagaaacaagaggaggagagatctaaagttgat
gacctcagagggacgcccatgtccgtgggaactctggaggagatcattgatgataatcac
gccattgtgtcgacgtcagtgggatctgaacattacgtcagtattctgtcatttgtagat
aaagacctccttgagcccggctgctccgtgttactgaaccacaaggttcatgcggtaatc
ggggtgctgatggatgacacggatcctctggtgaccgtaatgaaagtagagaaagcccca
caggaaacgtacgcagacatcggaggtctggacagccaaattcaagagatcaaggagtct
gtggagcttcccctcacacatccagagtattatgaagagatgggaataaagccacctaaa
ggggtcattctgtacggtgcaccgggaacaggcaagactcttctggcaaaagcggtggcg
aaccagacgtctgccaccttcctgagggtagtgggctcagagcttattcagaaatacctg
ggtgatggtcccaaactggtgcgagagctcttcagagtggccgaggaacacgctccgtcc
atcgtcttcatagacgagattgacgctatcggcacaaagaggtacgactccaattcagga
ggagagcgtgagatccagagaacaatgctggagctgttaaaccagttggatggatttgac
tcccgtggagatgttaaagtcatcatggctactaataggatagagacacttgacccagct
ctcattagaccaggtagaattgatcgtaagatcgagttccccctgccggatgagaaaacc
aagcgcagaatctttcagatccacaccagcaggatgacggtggcagatgacgtgactttg
gacgacctcatcctggctaaagacgacctctccggtgctgacatcaaggccatttgcaca
gaggcaggactgatggctctgagggaacgaaggatgaaagttacgaatgaagacttcaaa
aagtccaaagagaacgtcctgtacaagaagcaggaggggacaccggaggggctgtacctt
taa
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