Panthera tigris altaica (Amur tiger): 102951806
Help
Entry
102951806 CDS
T02988
Symbol
COL22A1
Name
(RefSeq) collagen type XXII alpha 1 chain
KO
K16630
collagen type XXII alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102951806 (COL22A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102951806
NCBI-ProteinID:
XP_007073907
LinkDB
All DBs
Position
Un
AA seq
1558 aa
AA seq
DB search
MHVPTRGRAVACLLWLLLLWSGDGGCRAQRAGCKTVHYDLVFLLDTSSSVGKEDFEKVRQ
WVANLVDTFEVGPERTRVGVVRYSDRPATAFEQITRPTMVRSLPWPKDGGSGGQTDLDLE
FASLMLSSVTWGRVAESSHPSSLSGGVPDPPTSLGPAAFILASPYSFPLALITCWRYVLC
PSVRVQGDRFKHTNGDSKEITGFDLMDLFRVKEILGKRDNGAQSSYVRMGSFPVVQRTED
VFTQGLPDEYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYDAVGAM
KDAVRVVFQGPRVSDLFDRDWHKIALSIQAQNVSLYIDCVLVQTLPIEERENIDIQGKTV
IGKRLYDSVPIDFDLQRIVIYCDSRHAELETCCDIPSGPCQVTVLTEPSPPPQRPPTVGS
EQIGFLKTINCSCPAGEKGEKGSDGPVGLPGPKGDTGATGLAGAPGPKGEKGDVGRGPFV
HGEKGEKGSLGLPGPPGRDGSKGMRGEPGEPGLPGEGGMRGFQGPPGPPGPPGHVGAPGL
QGERGEKGARGEKGERGLDGFPGKRGETGEQGRPGPPGVAGPQGEKGDVGPAGPPGVPGS
VVQREGLKGEQGAPGPRGHQGPPGPPGAPGLMGPGGKAGPPGLQGLRGKKGEVGPPGTPG
LLGPQGPPGPPGVPGPPGPGGPPGLPGEIGFPGKPGHPGQAGPPGKDGQKGAPGLPGPEG
QPGERGEDGLPGNPGPRGEVGEQGLAGRPGDKGEAGVPGAPGFPGVQGQKGEQGEKGELG
LPGLKGDPGKKGEVGPAGPPGLPGTTPLFTPHPRMPGERGPKGEKGDPGMPGEPGSQGHP
GELGPRGPIGAPGAKGQEGPRGAPGAAGNPGTPGAAGLPGASGPPGSAGPPGIRGPPGKD
GEHGEKGAAGEEGSPGPAGPRGDPGAPGLPGIPGQGKDGEPGLRGPPGLPGPLGTKGDRG
APGIPGSPGNRGDPGIGLAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGQDGVPGNPGE
RGPPGKPGPSSLLSPGDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLQGKPGREGTEGK
KGDAGPRGLPGPPGIAGPQGSKGERGAAGEAGQKGDQGHPGVPGFMGPPGNPGPRGADGV
AGAAGPPGIQGPPGKEGPPGPEGPSGLPGIPGEEGKEGRGGKPGPPGEPGKTGDPGLPGP
EGARGLPGFKGHTGDSGAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPPGLRGPPGK
NGSPGSPGDPGPAGSPGQKGNKGDHGSPGLPGFLGPRGPQGEPGEKGIPGKEGTPGKPGE
PGPKGERGDPGNKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGPPGENGLAGPPGPPGQ
PGFPGLRGESPSMDTLRRLIQEELEKQLETKLAYLLAQRPPAQMKSSQGRPGPPGPPGKD
GLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPG
EPGYAKDGLPGAPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPGNVKGP
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttcccacgcgcgggagagccgtggcctgcctcctgtggctgctgttgctgtgg
agcggggacggcggctgtcgggcccagagggcaggctgcaagaccgtgcactacgacctg
gtcttcctcttggacacctcctccagcgtgggcaaggaggactttgagaaggtgcggcag
tgggtggccaacctggtggacaccttcgaggtggggcccgagcgcacccgtgtgggcgtg
gtgcgctacagcgaccggccggccacggccttcgaacagatcactcgacccacgatggtc
cgcagcctgccgtggcccaaagatgggggtagtgggggtcagacagacctggatttggag
tttgcatccctgatgctgagctctgtgacctggggacgagtcgctgagtcttctcaccct
tcaagtctcagtggaggcgtccccgaccctccaaccagcttggggcccgctgcgttcatc
ctggcctcgccttacagcttcccactggctctcatcacctgctggagatacgtgctgtgc
cccagcgtccgtgtgcaaggagaccgatttaagcacaccaatggcgacagcaaagaaatc
acaggttttgacctgatggatttgttccgtgtgaaggagatcctggggaagagagacaac
ggagcacagagttcctatgtccggatgggatccttccctgtggtgcagaggacagaggat
gtgttcacacaaggtttgcctgatgagtatgccttcgtcaccaccttccggttcaggaaa
acgtctcggaaagaagactggtacatctggcaggtcattgaccagtacgggatcccacag
gtctccatccggctggatggcgagaacaaggcagtggagtacgatgccgtgggcgccatg
aaggacgccgtgagggtggtgttccaaggcccccgggtcagtgacctctttgaccgggac
tggcacaagatcgccctgagcatccaggcccagaacgtctccctgtacatcgactgtgtg
ctggtgcagacgctgcccatcgaggagcgggagaacatcgacatccaggggaagaccgtg
atcggcaagcgcctatatgacagcgtgcccatcgactttgacctgcagcggattgtgatt
tactgtgactcccgacacgcggaattggagacttgctgtgacatcccctcaggcccgtgc
caggtgactgtgctaacggagccttcgcccccgccccagcggcctcccaccgtgggcagt
gaacaaatcgggtttttgaagaccatcaactgctcctgcccggctggagaaaagggcgag
aaggggtccgatggtcccgtgggactccccggcccaaagggagacacgggagccactggg
ttggctggagctcctggacccaagggagaaaaaggtgacgtgggcagggggccttttgtc
catggagagaagggtgaaaagggttccctgggcctgcccggtccccctgggagagacggc
agcaaaggcatgcggggggagccgggagagccggggcttcctggagaggggggaatgcgg
ggattccaaggaccacctggaccccccgggcctcctggacacgttggagctcctggtctc
caaggagaacgaggtgaaaagggagcccgaggagaaaagggggagcgaggcctggatgga
ttccctgggaagcgtggggagacgggagagcagggaagacctggccctcctggcgtggca
gggccccagggagagaagggtgacgtggggcctgcaggacctcctggggtaccgggctct
gtggtgcagagagagggcctgaagggcgagcagggagctccaggaccacgaggccaccag
ggcccacctgggccaccaggagctccgggtctgatgggtcccggaggcaaggctggacct
cctggtttgcaaggtctccgggggaagaaaggagaagtgggcccgccgggaacccctgga
ttgctggggccgcagggccctccaggaccacctggcgtccccggtccccctggacccgga
ggccccccgggtttacctggagagatcggcttcccaggaaaacctgggcaccctgggcag
gcgggcccacctggaaaggacggacagaagggagccccaggcctgccgggacccgagggg
cagccaggagagagaggggaagacggtctgcctggaaaccccggccccaggggtgaagtt
ggggagcagggcctggcaggccgacctggagacaagggagaggcaggtgtccctggtgct
ccaggatttccaggcgtgcagggacagaaaggagagcagggcgagaaaggggagctgggc
ctcccaggcctgaaaggtgacccaggcaaaaagggtgaagttggtcctgccggcccccct
gggttgcctggaacgacgcccctgttcacgccgcaccccaggatgccaggagaacgaggg
ccgaaaggagagaagggtgatcccggcatgcctggcgagccgggatctcaaggccatcct
ggagaactggggcctcggggacccatcggagcgccgggtgccaagggacaagaaggcccc
cggggggcacctggagcggctggaaaccctggcactcctggagctgcaggcctgcctggt
gccagcggccccccaggaagcgcgggcccacctggcatcagaggcccccctggaaaagat
ggggagcacggtgagaagggagcagcaggtgaagaagggagtccaggaccagctggtccc
agaggtgatcctggtgctcccgggctcccagggatacccggacagggaaaagacggagag
ccggggcttcgtgggccacccggattacctggacctctaggaaccaagggggaccgaggt
gcacctgggatccctggctcccctggcaaccgtggcgacccaggcatcgggttggctggc
cctcctggaccctctggaccaccaggagacaaagggcccccgggatcccgaggcttaccc
ggattccccggcccccagggaccagctggccaggacggtgtaccaggaaatccaggagaa
agagggcctcctggcaaaccagggccttcttctctactgtctccaggggacataaatctc
ttggtcaaggatgtatgcaatgactgccctccaggccccccaggccttcctggtctgcca
ggttttaaaggggacaagggtctccagggaaagccagggagagaaggcacagaagggaaa
aagggagatgctgggcccaggggcctcccagggcctccaggaatcgctggaccacaggga
agtaaaggagagcgtggtgcagctggggaagctggacagaaaggtgaccagggtcatcct
ggagttcctggtttcatgggaccccccgggaaccctgggccacggggagcggatggcgtt
gctggggccgctggacctccagggatccaagggccgccggggaaagaaggtcctcctggc
cccgaaggcccatctgggttacccggaatcccgggagaagaaggcaaagagggcagaggt
ggaaaaccaggtccccccggggagccgggcaaaactggagacccgggtctaccaggacca
gagggagcccgtggcctgcccggcttcaagggacacacaggcgactctggtgcaccgggt
ccccggggagagcctggtgccatggggccccctggccgggaagggtcgccaggaaaagat
ggtgacactggacccacagggccacagggtcccccaggactaaggggcccaccgggtaag
aatggatcaccgggatctccaggagaccctggccctgcaggaagccctggccagaagggg
aacaaaggagaccacggcagcccgggactccccggctttctgggtccccgggggcctcag
ggggagccaggcgagaagggcatcccaggcaaggagggcacccccgggaagcctggagag
ccaggacccaaaggagaaaggggagaccccgggaacaaaggtgacaaaggaccccctggt
gggaagggccagcctggggaccctggaatccccggtcacaaaggccacacaggcctgatg
ggccctcaaggaccacctggggagaatggactggccgggcccccggggcctccgggacag
ccaggatttccgggactgaggggggagtctccttccatggacaccctgcggcggctcatc
caagaagagcttgagaaacagctggaaaccaaacttgcctacctcctggcccagaggccc
ccggcacagatgaagtcctctcaaggcagacctgggcccccggggccccctggaaaagat
gggcttccaggaagggcaggccccatgggcgagccagggcggcccggacaggggggtctg
gaagggccgtctggaccaataggtcccaaaggtgagcgaggagccaaaggagacccgggt
gcacctggagttggcctccgaggggagatggggccgccgggcatcccaggtcagcccggg
gaacctggctatgctaaagatgggctccccggggcccccggccctcaaggggagacggga
ccagcgggacaccctggccccccaggcccaccggggccccctggccagtgtgacccctcc
cagtgtgcctacttcgccagccttgctgcccggccagggaatgtgaagggcccctag
DBGET
integrated database retrieval system