Panthera tigris altaica (Amur tiger): 102955757
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Entry
102955757 CDS
T02988
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102955757 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102955757 (LIG4)
Enzymes [BR:
ptg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102955757 (LIG4)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102955757 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102955757
NCBI-ProteinID:
XP_007075357
UniProt:
A0A8C9JKZ3
LinkDB
All DBs
Position
Un
AA seq
911 aa
AA seq
DB search
MATPQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTVQQVNDLLDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGFNYTD
QFGDSPQEGSLTPFIHGAFKTDVQNCILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYDILTSVFTPIPGRIDIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQIKATEIVPSEMYKTGCTLRFPRIEKIREDKEWYECTTLDDLE
QLRGKASGKLASKHLYVGGDDEPQEKRRKAAPRIKKVVGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTNSHPKPDLENRLAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNEHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSGEQSPGEIASMIANLEYRYSWDHSPLSMFRHHIIYLDLYAVVNDLSTKIEGTRLAF
TALELRFHGAQVVSCLAQGVSHVIIGEDHSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccacagacttcacaaaccgttgcgtctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgggcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcatgatgcccttcataagaaccaaaaagatgtc
agggactctttttatccagcaatgagacttattctccctcagctcgaaagagaaagaatg
gcctatggaatcaaagaaaccatgcttgctaaactttatattgagttgcttaatttacct
agagaaggaaaagatgcccttaagcttttaaattacaggacacccactggaactcgtgga
gatgctggagactttgcgatgattgcgtatttcgtgttgaaaccaagatgtttgcagaaa
ggaagtttaacagtacagcaagtaaatgaccttttagactcaattgccagcaataattct
gccagaagaaaggacctaataaaaaagagtcttcttcagcttataagtcagagttcggca
ctggaacaaaagtggcttatacggatgatagtaaaggacttgaaacttggctttagtgag
caatctgtattttctgcattccacaatgatgctgccgagttgcataatgtcaccacggat
cttgaaaaagtctgtaggcaactgcacgatccttccgtcggacttagtgatatttctatc
actttattctctgcctttaaaccaatgctggctgccatagcagatattgagagaattgag
aaggacatgaaacaccagagtttctacattgagaccaagctagacggtgagcgtatgcaa
atgcacaaggatggggatgtgtatcagtacttctcccggaacgggtttaactatacagat
cagtttggagattctccacaggaaggctctcttacaccattcattcacggtgcattcaaa
acagacgtgcaaaactgtatcctggatggtgagatgatggccttcaaccctaatacacaa
acttttatgcaaaaggggaataagttcgatatcaagagaatggtggaagattccgatctg
caaacttgttactgtgtttttgacgtactgatggttaataataaaaagctagggcgtgag
accctgaaaaagaggtacgacattctcactagtgtttttacaccaataccaggtaggata
gacatagtgcaaaaaacacaagctcatacgaagaaagaagtaattgatgctttgaatgaa
gcaatagacaaaagagaagagggaatcatgatcaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcgatgggttgatggat
gaactggacaccttaattgtggggggctattggggtaaaggttcgcgaggcggaatgatg
tctcattttctgtgtgctgtagcagagaaacctcctcctggtgaaaaaccctccatgttt
cacactctctgtcgtgttggttcaggttataccatgaaagaactgtatgatctgggtttg
aaattggccaagcattggaagccttttcataaaaaagctccaccaagtagcatcttatgt
ggaacagagaagccagaagtgtacattgagccttgtcattctgtcatcgttcagattaaa
gcaacagagatcgtccccagtgagatgtataaaactggctgcaccttgcgtttcccccga
attgaaaagatcagagaagacaaagagtggtatgaatgtaccaccctagatgacttagaa
caacttcgagggaaagcatctggaaagcttgcgtccaaacacctttatgtcggtggtgat
gatgaaccacaagagaagaggcggaaagctgccccaaggatcaagaaagttgttggaatc
attgagcacctaaaagcacctaacctttctaatgtaaacaaagtttctaacgtatttgaa
gatgtggagttttgtgttatgagtggaacaaacagccatccaaagcccgatctggagaac
agacttgcggaatttgggggttatatagtacaaaatccaggcccagacacctactgtgtg
attgcagggtccgagaacatcagggtgaaaaacataatttcttccaatgaacatgatgtt
gtcaagcctgagtggctgttagagtgttttaagaccaaaagctgtgttccatggcaacct
cgctttatgattcatatgtgcccatcgacgaagcagcattttgcccgtgaatatgattgt
tatggcgatagttatttcgttgatacagatttgaaccaactgaaagaagtgttctcagga
attaaaaattccggcgaacaaagtcctggagaaatagcttccatgattgctaatttagaa
tatcgatattcctgggaccactccccactcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttgttaatgacctgagtaccaaaatcgaggggacgaggttagctttt
acagctttggaacttcgatttcatggagcacaagtagtttcttgtttagctcagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttgcagatttgaaagcttttcgaaga
actcttaagagaaaatttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgaattgcaggaggaaaatcagtatttggtttaa
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