Panthera tigris altaica (Amur tiger): 102963057
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Entry
102963057 CDS
T02988
Symbol
THOC1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102963057 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102963057 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102963057 (THOC1)
03041 Spliceosome [BR:
ptg03041
]
102963057 (THOC1)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102963057 (THOC1)
Spliceosome [BR:
ptg03041
]
Complex C
Other components
EJC/TREX
102963057 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102963057 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
102963057
NCBI-ProteinID:
XP_007076006
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKAGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccactcttcagtttgcccgaagcgcggacgcggtttacgaagtct
actagagaggccctgaacaacaaaaatataaagccgttgttgaataccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattattgggagatgtt
ttggattgtcttcctttggatcagtgtgacacgatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatctactacgtatgtgc
aatgatctcctaagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcatactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaagattacttcaggaatcctgtgcaatgctatgagaagatttcgtggaaaactttt
ctgaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaagcaggaggagaacatgtgtattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgccgacac
atcctgttgcaatacctcattttattccagtatctcaaggggcaagtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactgtggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcgtggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccaacaagagtagctcgcaagagaacggcaccagag
gacttcctagggaaaggacccaacaaaaagattctaatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataacatggaagcttgcaaatcagagacaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattatggttggagagccctgagactacta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgtccggcgagacaaacctgtgacaggggaacaaatagaagtatttgccaacaag
ctgggcgaacaatggaagatcctggctccctacttggaaatgaaagactcggaaattaga
cagattgagtgtgacagcgaagatatgaagatgagagctaagcagctactagtcgcctgg
caagatcaagagggagtacatgcaacgcctgagaatctgatgaatgcactgaacaagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
