Panthera tigris altaica (Amur tiger): 102965006
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Entry
102965006 CDS
T02988
Symbol
SCN10A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 10
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptg04040
]
102965006 (SCN10A)
Ion channels [BR:
ptg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102965006 (SCN10A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
102965006
NCBI-ProteinID:
XP_007081081
LinkDB
All DBs
Position
Un
AA seq
1962 aa
AA seq
DB search
MAFPFGSLETTNFRRFTPESLVEIEKRITAKQAAKKAKDKHREQKDQEEKPRPQLDLKAC
NQLPKFYGDLPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVGMTQTELPERIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYIGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCTALNETGNYSSYGKPDF
YYNKPGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTASLHSHNGSPLASKTASERMSRMKPRVSEGSTDDSKSP
QSDPYNQRRMSFLGLTSGRHRASHGSVFHFRAPCLDASFPDGATDDGVFPGDRDSRRGSL
LLGGGAGQQGPLPKSPLPQPSNPGSGLGEDRHSTLPTGELAPGGMEVSAFDAGQKRTFLS
AEYLNEPFRAQRAMSVVSIMTSVLEEFEESERRCPPCLTSLAKKYLIWECCPTWVKLKTL
LFGIVTDPFAELTITLCIVVNTVFMAMEHHRMSPAFEAMLQIGNIVFTVFFTAEMVFKII
AFDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHNISAPNEEWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPDEDGEVNNLQMALARIQAFGHRTRKALCSFFSRPRLLPWPKAEPQLAVKLPLSSAK
AENHIAPDVATGSPEGLPEPRGPRVNHSDFITNPSIWVSVPIAEGESDLDDLEEDGEEDG
EEVGEEDGAQGSQQEVTPQEQQEQPQQVGRYEDHMAPRSPGSGMSSEDLAPHLGEKWKDE
SPAQGPAEGVDDTSSSEGSTVDCLDPEEILKKIPELADDLEEPDDCFTEGCIRHCPCCKV
DASKFPWAVGWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEY
TDRVFTFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKA
LRTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFG
RCVNKTNENLSLVPLSIVNNMSDCKDQNHTGSFFWVNMKVNFDNVAMGYLALLQVATFKG
WMDIMYAAVDSRDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKL
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDVVTRQAFDIIIMVLICL
NMITMMVETDDQSEEKTKILNKVNQFFVAVFTGECVMKVFALRHYYFTNGWNVFDFIVVV
LSIGSLVFSAILTSLENYFSPTLSRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMAGFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLS
PILNTGPPYCDPXSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSE
PLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQNVLIQMDLPLVP
GDKIHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKASYEPIATTLRWKQEDIS
ATVIQKAYRSYVLHRSKTTSSPPGVPRAEEEAVSPPDEAFAGFMANENCALPDKSESVSA
VSFPPSYDSVTRGLSDQVNLSTSSSMQNEDEATSKKATAPGP
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccctttgggtccctggaaactaccaacttccgtcgattcactccagagtcc
ctggtggagattgaaaagcgaattactgccaagcaggcagcaaagaaagccaaagataag
cacagagagcagaaggaccaagaagagaagcctcggccccagctagacttgaaagcttgc
aaccagctgcccaagttctatggtgatctccctgcagagctggttggggagcccctggag
gatctggaccccttctacagcacacaccggacgtttatggtgctgaacaaagggaggacc
atttctcggtttagtgcaactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
gtcactattttggtcaattgtgtgggcatgacccaaaccgagcttccagagagaattgag
tatgtcttcactgtcatttatacctttgaagccttgataaagattctggcaagaggattt
tgtctaaatgagtttgcttacctgcgagatccttggaactggttggattttagcgtcatt
accctggcatacattggcgaagcgatagatctccgagggatctcaggcctgcggacattc
agagttcttagagccttaaagacagtttctgtgatcccggggctgaaggtcattgtggga
gccctgatccactcggtgaagaaactggcggatgtgaccatcctcactgtcttctgcttg
agtgtctttgccttggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgtaccgctctcaatgagacaggcaattactcctcttatggaaaaccagatttc
tactacaataagccaggcacttcagatcccttactgtgtggcaatggatctgatgcaggc
cattgccctgaaggttatttctgtcttaaaacatctgacaacccagattttaactacacc
agcttcgactcctttgcttgggctttcctgtcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagacgctgagggcttctgggaaaatgtatatggtctttttc
gtgctggtcatctttctggggtctttctacctggtcaacttgatcttggctgtggtcacc
atggcatatgaggagcagaaccaggccaccattgatgaaattgaagccaaggagaaaaag
ttccaggaggccctcgagatgctccggaaggagcaggaggtgctggcagccctggggatt
gacacagcttctctccattcccacaatggatcacctttagcctccaaaactgccagtgag
agaatgtccaggatgaagccgagggtgtcagagggctccacagatgacagcaaatcaccc
caatctgatccttacaaccaacgcaggatgtctttcctaggtctcacctctgggaggcac
cgggctagccacggcagtgtgttccatttccgggccccttgcctggacgcctcattccct
gatggggccacagatgatggagtctttcctggagaccgtgacagccgtcggggctccctg
ctgctgggtgggggtgccggccagcaaggccccctccctaagagtccactgcctcagccc
tccaaccctggctcaggacttggagaagacagacactccacattgcccactggtgagctt
gctcctggaggcatggaagtctcggcatttgatgcaggacagaagaggactttcttatca
gcagaatacctgaatgaacctttccgagcccaaagggcaatgagtgttgtcagcatcatg
acctctgtccttgaggaattcgaggagtctgaacggaggtgcccaccctgcttgaccagc
ttggctaagaagtatctgatctgggaatgctgccccacatgggtgaagctcaagacactt
ctctttgggatagtgacagacccctttgcggagctcaccatcaccttgtgcatcgtggtg
aacacagtcttcatggccatggagcatcaccgcatgagccccgccttcgaagccatgctc
cagataggcaacattgtctttaccgtgttttttactgctgaaatggtcttcaaaatcatt
gccttcgacccctactattacttccagaagagatggaacatctttgactgcatcatcgtc
accgtgagcctgatagagctgggtgcagccaagaagggaagcctgtcagtgctgcggacc
ttccgcttgctgcgggtcttcaagcttgccaagtcctggccaaccttaaacacgctcatc
aagatcattgggaactcagtgggggcgctggggaacctcaccatcatcctggccatcatt
gtctttgtcttcgctctggttggcaagcagctcctgggggataactaccgtgacaaccgg
cacaatatctctgcgcccaatgaagaatggccacgctggcacatgcacgacttcttccac
tccttcctcatcgtcttccggatcctgtgtggagagtggattgagaatatgtgggcctgc
atggaagttggccagaaatccatatgcctcatccttttcttaacagtgatggtgctcggg
aacctggtggtgctcaatctgttcattgccctgctgttgaactccttcagcgctgacaac
ctcacagctccagatgaagacggggaagtgaacaacctgcagatggccctggcacggatc
caggcatttggccatcgtacccggaaagccctttgcagcttcttcagcaggccccgcctg
ctaccctggcccaaggcagagccccagctggcggtgaaactcccactgtctagtgccaaa
gctgagaaccacattgctcccgatgtagccacggggagccccgaagggctcccagagccc
cgaggccccagggtcaaccacagcgacttcatcaccaatcccagcatatgggtctctgtg
cccattgctgagggtgaatctgaccttgatgacttggaggaagatggtgaggaggatggt
gaagaggttggtgaggaggatggtgctcagggctcccagcaggaagtgacccctcaagag
cagcaggagcagccacagcaagttgggagatatgaggaccacatggcacccaggagccca
ggctctggaatgtcctctgaggacctggctccacacctgggtgagaagtggaaagatgag
tctcccgcccagggccccgcagagggggtggacgacacgagctcctcagagggcagcaca
gtggactgcctggatccggaggagatcctgaagaagatccccgagctggcggatgacctc
gaagagccggatgactgcttcacggaaggctgcattcgccactgtccctgctgcaaagtg
gacgccagcaagtttccatgggccgtgggctggcaggtacgcaaggcctgctatcgcatc
gtggagcacagctggttcgagagcttcatcatcttcatgatcctgctgagcagcgggtct
ctggcctttgaagactattaccttgaccagaagcccacggtgaaggccttgctggaatat
actgacagggtgttcacatttatctttgtgttcgaaatgctgctcaagtgggtggcctac
ggcttcaagaagtacttcaccaacgcctggtgctggctggacttcctcatcgtgaacatc
tccctgacaagtcttatagcgaagatcctgcagtattctgatgtggcatccatcaaagcc
cttcgaaccctccgtgccctgcggcccctgcgggctctgtctcgatttgaaggcatgcgg
gtggtggtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgc
ctcatcttctggctcatcttcagcatcatgggcgtgaacttctttgctgggaagtttggg
cggtgcgtcaacaaaaccaatgaaaacctttctcttgtgcctttatctatcgtgaataac
atgtctgactgtaaagatcagaaccacactggcagcttcttctgggtcaacatgaaggtc
aacttcgataatgttgcaatgggttacctcgcccttctgcaggtggcaacctttaaaggc
tggatggacatcatgtatgcagctgttgattcccgagatgtgaacttgcagcccaagtgg
gaggacaatgtgtacatgtacttgtacttcgtcatcttcatcattttcggtggcttcttc
acactcaatctcttcgttggggtcataattgacaacttcaatcaacagaaaaaaaagtta
gggggccaggacatcttcatgacagaggagcaaaagaagtactataatgccatgaagaag
ctgggctccaagaagccccagaagcccatccctcggcccctgaacaagtaccagggcttt
gtctttgacgttgtgaccagacaagcttttgacatcatcatcatggtcctcatctgcctc
aatatgatcaccatgatggtggagactgatgaccagagtgaagaaaagacaaaaatcctc
aacaaagtcaaccagttctttgtggctgtcttcacgggagagtgtgtcatgaaggtgttc
gccttacggcattactacttcaccaatggctggaatgtctttgacttcattgtcgtggtc
ctctccattgggagcctggtgttttctgcgattctgacgtcactcgaaaattacttctcc
ccaacgctctcccgagtcatccgcctggcccgaatcggccgcatcctcaggctgatccga
gcggccaaggggatccgcacgctgctctttgccctcatgatgtccctgcccgccctcttc
aacatagggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccggc
ttcgcctacgtcaagtgggaggccggcatcgacgacatgttcaacttccagaccttcgcc
aacagcatgctgtgcctcttccagatcaccacgtcggccggctgggacggcctcctcagc
cccatcctcaacacggggcccccctactgcgaccccngctcccgggggaactgcgggagc
ccggccgtgggcatcctcttcttcaccacctacatcatcatctccttcctcatcgtggtc
aacatgtacatcgcagtgattctggagaacttcaatgtggccacacaggagagcagtgaa
cctctgagtgaggacgactttgacatgttttatgagacctgggagaagtttgacccggaa
gccactcagtttattaccttttctgccctctcggactttgcagacaccctctctggcccc
ctgcgaatcccaaaacccaatcagaatgtattaatccagatggacctgcccttggtccct
ggagataagatccactgtttggacattctttttgccttcactaagaatgttctgggagaa
tctggggagttggattctctgaaggcaaacattgaagagaagtttatggcaactaatgtt
tcaaaagcatcttatgaaccaatagcaaccaccctccggtggaagcaagaagacatttcg
gctactgtcattcaaaaggcctatcggagctatgtgctgcaccgctccaagacaacctcc
agccctccaggtgtgcccagggctgaggaggaggctgtgtcacccccagatgaagccttt
gctggattcatggcaaatgaaaactgtgccctcccagacaaatctgaaagtgtgtctgct
gtatctttcccaccatcctatgacagtgtcactagaggccttagtgatcaagtcaacctg
agcacatccagctcaatgcagaatgaagatgaagctaccagtaagaaagcaactgcccct
gggccctag
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