Panthera tigris altaica (Amur tiger): 102969703
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Entry
102969703 CDS
T02988
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
KO
K14328
regulator of nonsense transcripts 3
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102969703 (UPF3A)
03015 mRNA surveillance pathway
102969703 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102969703 (UPF3A)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102969703 (UPF3A)
mRNA cycle factors
P-body specific factors
102969703 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102969703
NCBI-ProteinID:
XP_015399877
LinkDB
All DBs
Position
Un
AA seq
518 aa
AA seq
DB search
MLDVEHHGSGERGEGEGAVSSQFSRGFALGRRQRRLRGGCEMRSEKEGAGGPGAXARGGR
GKPPAVEVQFRRESPRREPEAPPASFFVCGDGTCKHREEKKTVLSKVVIRRLPPSLTKEQ
LEEQLHPLPAHDYFEFFTADFSLYPHLYSRAYINFRNPDDILLFRDRFDGYIFIDSKGLE
YPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKTNANPETLLGDME
AKTRELIARRTTPLLEYIRNRKLEKQRIREEKREERRRRELEKKRLREEEKRKKRDEERC
KRKEADKQKRTAERELLKKPEKGEEPTTEKPKERGEEMDTRDGEQESCPGCAVRKPMPLG
SSLEEPREKSQNESNEEQRELDRKFREKDLETQRCHLDDNRKQRAHCEFDTFSRRNEEEP
RWGKGGPPDRGKKGSQDSGNAVEAAEWPGKEQRSEGGPAAKMERPGNKVLPALQLSQPRV
HIRAREGGRGTSVECPGRNRDEAEDSAQGGSQKSEEAG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgtggagcatcatgggtcgggggagcggggggagggagaaggggcggtgtcg
tcccagttctcgcgaggtttcgccctgggaaggaggcagaggcggctccgcggcgggtgc
gagatgcgctcagagaaggagggggccggaggcccaggcgcgngggcccggggggggagg
ggaaagccgccagccgtggaagtccagttccgccgggagtcgccgcggcgagaacccgag
gcgccaccagcctcgttcttcgtttgcggggacggcacttgcaaacatcgcgaggagaag
aaaacggtcctgagcaaggtggtcatccggcggcttcctcccagcctcaccaaggagcag
ctggaagagcagctacacccactgccggcacatgattactttgagttctttactgccgat
ttcagtctttatcctcatctctactcaagagcatacattaattttagaaatcctgatgac
atccttctttttagagatcgttttgatggatatatcttcattgacagtaaaggcctagaa
tatcctgcagtggtagagtttgccccattccagaagatagccaaaaagaagctaaagaaa
aaagatgccaaaaccggaagcattgaagatgatccggaatacaagaagtttttggaaact
tactgtgtggaggaagagaaaacgaatgccaatcctgaaactcttctgggagacatggag
gcaaagacaagagagcttattgctagaagaaccacacctcttttggaatatattagaaat
agaaaattagagaagcagaggattcgagaagagaagcgagaagagcgaaggaggagggag
ctggagaagaagcgcttacgggaagaagaaaagagaaaaaagagagacgaggagaggtgt
aagagaaaagaagcagacaaacagaagagaacagcagagagagaacttcttaagaaacca
gaaaagggagaggaaccaaccactgagaagccaaaagaaagaggagaggaaatggatact
agagatggagaacaggagtcctgtcctggctgtgctgtccggaagcccatgcccttgggg
agctcgctggaggagcccagggaaaagtcacagaatgagagcaatgaagagcaaagggag
ttggaccgaaaattcagagaaaaagaccttgaaacacaaagatgccacttggatgacaat
agaaagcagagagctcactgtgagtttgacacgttttcgcggagaaatgaggaggagccg
agatgggggaaaggaggcccccccgacagagggaagaaggggagccaggacagtggcaac
gctgtggaggcagcagagtggcccgggaaagagcagaggagtgaaggtggcccagcagcc
aaaatggagcgcccaggaaacaaggttctgccggccttgcagctgtcacagccaagagtt
cacatccgagcacgagaaggtggtaggggaacttctgtggagtgccctggcaggaacagg
gacgaggctgaagattcagcacaggggggttcccagaagagcgaagaggcggggtga
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