Providencia stuartii 2017-45-35: OI982_19890
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Entry
OI982_19890 CDS
T09168
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptha
Providencia stuartii 2017-45-35
Pathway
ptha03410
Base excision repair
ptha03430
Mismatch repair
ptha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI982_19890 (recJ)
03430 Mismatch repair
OI982_19890 (recJ)
03440 Homologous recombination
OI982_19890 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptha03400
]
OI982_19890 (recJ)
DNA repair and recombination proteins [BR:
ptha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OI982_19890 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OI982_19890 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OI982_19890 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2065
Motif
Other DBs
NCBI-ProteinID:
WIJ73669
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Position
4212838..4214571
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AA seq
577 aa
AA seq
DB search
MNVETFLRQRTLAEDIKTLDGFPEILQRVYAHRGVTDISQLERKAANLLDYRTLSGIDNA
LTLLYSALENHSVITIVGDFDADGATSTALAIRALKSMGYVNLNYIVPNRFENGYGLTPL
VVEEAYKRGADLIITVDNGISSHEGVEAARQHDIKVIVTDHHLPGDVLPKADAIINPNLE
GCQFASKSLAGVGVTFYLMSALRAKLRQEGWFVKQGMSEPNLAEFLDLVALGTVADVVPL
DTNNRILVHQGLHRVRAGRCCAGIKALIEVSKRECSRLVANDFGFALGPRLNAAGRLDDM
SVSIELLLTDDMAYARELANELDGLNQARREIEAGMQQEASVLFNKIEYSDSQLPNGLAI
YHPEWHQGVVGILASRIKEQYHRPVIAFAPAGDGTLKGSGRSVPGVHMRDALERLNTLQP
GLMQKFGGHAMAAGLSLEESKFGLFKQHFESLMGELIQPDQLSGVVWSDGELKQDEFTLE
IAELLRESGPWGQSFPEPVFDGYFRLLQQRLVGERHLKMMLEPVKGGPMLDAIMFNIDVR
RWPDNSVKRAKIAFKLDVNEFRGQKSVQLMVEHIWPE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtagaaacttttttacgccagcgtacactcgctgaggatattaaaacactggat
ggttttcctgaaatccttcagcgagtttatgcccatcgaggcgtgacggatatttcacag
ctagagcgtaaagccgctaacttattagattaccgcacgttatcagggatagataacgca
ttaacgctactttatagtgcattggagaaccatagcgtaattaccatcgtaggggatttc
gatgctgatggcgctacgagtacggctttagctattcgcgcattaaaatcaatgggatat
gtgaacttaaattacattgttccaaatcggtttgaaaatggttatgggctgacgcctctt
gtcgttgaggaagcctacaaacgcggcgcggatcttatcatcaccgttgataatggtatt
tcgtcacacgaaggtgtcgaagcggctaggcagcatgatattaaggtcattgtgacggat
caccatcttccgggagatgtattaccgaaggccgatgccattattaaccctaatctagaa
gggtgccaatttgcttctaaatcattagcaggcgttggcgtgactttctacttaatgtcc
gcgttacgcgccaaattgcgccaagaaggctggtttgttaagcagggaatgagcgaacct
aatttagccgaattcttagatttagttgcgctcggaacagtggcagatgttgttccactt
gatactaataatcgtattttagtgcatcaaggtctgcatcgtgttagggcggggcgttgt
tgtgcggggatcaaagcattaatcgaggtctcaaagcgggaatgctctcgtttggtcgcc
aacgactttggttttgctttagggcctcgtttgaatgccgcagggcgtttagatgatatg
tctgtgagtattgaattactcctgaccgatgatatggcttatgcgcgggaactggctaac
gagctggatggattaaaccaagcacggcgggaaattgaagcggggatgcaacaagaagct
tccgtgttatttaataaaattgagtatagtgatagccaattacccaatgggctagctatc
tatcatcctgagtggcaccaaggggttgtgggaatattggcgtcaaggattaaagaacaa
tatcaccgccctgtgattgcttttgcacccgcgggtgacggcacattaaaaggctcaggg
cgctcagtaccaggggtgcatatgcgcgatgcattagagcgcctaaataccctacaaccg
gggctaatgcaaaaatttggtggtcatgccatggcggctggcttgagcctagaagagagt
aaatttggcttatttaagcagcattttgaatcattgatgggggaacttattcaacccgat
caactatcaggtgttgtttggagtgatggtgaactcaaacaggatgagttcacattagaa
attgctgagttactacgtgaaagcggcccttgggggcaatcattccctgagcctgttttt
gacggctattttcggttgctgcaacagcgcttagtgggtgaacgccatcttaaaatgatg
ttagagccagtgaagggagggccaatgctggatgcgattatgtttaatatcgatgtgcgg
cggtggcccgataatagtgtgaaacgtgcaaaaattgcgtttaaactagatgttaacgag
tttcgaggtcaaaagagtgttcaactgatggttgagcacatttggcctgaataa
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