Providencia stuartii 2017-45-35: OI982_20130
Help
Entry
OI982_20130 CDS
T09168
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ptha
Providencia stuartii 2017-45-35
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptha03009
]
OI982_20130 (srmB)
Enzymes [BR:
ptha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OI982_20130 (srmB)
Ribosome biogenesis [BR:
ptha03009
]
Prokaryotic type
rRNA helicases
OI982_20130 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
CMS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WIJ73712
LinkDB
All DBs
Position
complement(4270573..4271916)
Genome browser
AA seq
447 aa
AA seq
DB search
MTATTFTELELDESLINALADKGYERPTAIQAAAIPAAMDGRDVLGSAPTGTGKTAAFLL
PAIQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAKELCAHNHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFANDIETIAGETRW
RKQTMLFSATLEGEAIRDFSERLLEDPVEIDAESSRRERKKIQQFYYRADNLQHKTALLC
HLLKQEDVTKSIVFVRKRERVREVVQWLRDAGIESCYLEGEMAQAKRNEAVRRLVTGQVK
VLVATDVASRGLDIDNVSHVFNFDMSRTADVYLHRIGRTGRAGRKGTAISLIEAHDYPLF
GKVSRYIEDSIKMRVIDSLRPSTKAPSESMMNKPKPSKKVLAKRKEKKKKEEESKKKTKV
RHRDKKNIGKRRKPNSSSTTPTRDNAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaccacatttactgaacttgaactcgatgaaagcctgatcaacgcgctggca
gacaaaggctatgaacgcccaactgcaattcaggctgccgctatccctgccgcaatggat
gggcgtgacgttttaggttcagcccctactggtacgggtaaaaccgccgcatttttgctg
ccagccatccaacacttacttgactttccaaggaaaaagtccggtcctccgcgagtgctg
atattaacaccaacgcgtgagctagccatgcaggttgcagaccaagcaaaagagttatgt
gcacataaccatctcgatatcgctacgattacaggcggtgtcgcgtatatgaaccatgct
gaagtttttagcgaaaaccaagatattgttgtcgcgacaacaggccgcttgcttcaatac
atcaaagaagaaaattttgactgtcgcgccgttgaaatcctgatccttgatgaagctgat
cgcatgctcgacatgggctttgccaatgatattgaaacaattgcaggtgaaacacgctgg
cgtaaacaaactatgctgttctctgctacccttgaaggcgaagctattcgtgatttttct
gaacgactgctagaagatcctgttgaaattgatgccgaatcgtcacgtcgcgaacgtaaa
aaaatacaacagttttactatcgtgccgataatttacaacacaaaacagccttgttgtgc
catctgctaaaacaagaggatgtgactaagtccattgtttttgttcgtaagcgtgagcgt
gtccgtgaagtcgtacaatggttacgagatgcaggtattgagtcttgttaccttgaagga
gaaatggctcaagcgaaacgtaatgaagccgttcgtcgtttagtgacagggcaagtcaaa
gtactcgtagcgaccgatgttgcatcgcgaggacttgatatcgataatgtcagtcatgtc
tttaactttgacatgtcgcgcaccgctgatgtgtatctccaccgtattggtcgtaccggt
cgtgcaggccgcaaaggcaccgctatttcactgatagaagctcatgactatccgctgttc
ggtaaagtcagccgttatattgaagactccattaaaatgcgagtcatcgatagtctacgc
ccaagcaccaaagcaccttcagaatctatgatgaataaaccaaaaccatctaagaaagtg
ctcgcaaaacgtaaagagaaaaagaaaaaagaagaagagtccaaaaagaaaaccaaagtt
cgtcatcgtgacaaaaagaacattggcaaacgccgtaaaccaaattcctcttctacgaca
ccaactcgcgataacgctgaataa
DBGET
integrated database retrieval system
