Pseudodesulfovibrio thermohalotolerans: LF599_06885
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Entry
LF599_06885 CDS
T09613
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pthe
Pseudodesulfovibrio thermohalotolerans
Pathway
pthe00521
Streptomycin biosynthesis
pthe00523
Polyketide sugar unit biosynthesis
pthe00541
O-Antigen nucleotide sugar biosynthesis
pthe01100
Metabolic pathways
pthe01110
Biosynthesis of secondary metabolites
pthe01250
Biosynthesis of nucleotide sugars
Module
pthe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pthe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LF599_06885 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LF599_06885 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LF599_06885 (rfbC)
Enzymes [BR:
pthe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LF599_06885 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WFS63880
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Position
1477545..1478114
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AA seq
189 aa
AA seq
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MEVYKTEFSGLLVLIPRVFQDERGFFLESYNAARFRELGIDCEFIQDNHAYSKDVGVLRG
FHFQTPPMAQAKLVWVTRGAVLDVVVDLRKGSPTYGRTEYAILSAANFKRMFIPKGFGHA
YATIMPDTEFQYKVDAPYSPAHEGGLAWNDPDIGMDWKPALQGREPILSEKDRLLPGLAG
FTSSFTFKD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctacaaaacggagttttccgggctgcttgtcctgattccccgtgtgtttcag
gacgagaggggatttttcctcgaaagctacaacgcagcgcgtttccgggagctcggcata
gactgcgagttcatccaggacaatcatgcctattcgaaggatgtcggcgtattgcggggc
ttccattttcagacgccgcccatggcccaggccaagctggtctgggtgacgcgcggcgcg
gtcctggacgttgtggtcgacctgcgcaaagggtcgcccacctatgggcggaccgagtac
gcgatcctgagcgccgcgaatttcaagcgcatgttcatccccaaggggttcggacacgcc
tacgccactatcatgccggacacggagttccagtacaaggtggatgcgccgtattccccg
gcccacgagggcgggcttgcctggaacgatccggacatcggcatggattggaaacccgcc
ctgcagggccgggagcccattctttccgaaaaggaccggctgttgccgggacttgccggg
ttcacctcttcctttactttcaaggattga
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