Paenibacillus thiaminolyticus: NDS46_00095
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Entry
NDS46_00095 CDS
T08812
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03030
DNA replication
pthi03430
Mismatch repair
pthi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDS46_00095 (holB)
03430 Mismatch repair
NDS46_00095 (holB)
03440 Homologous recombination
NDS46_00095 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pthi03032
]
NDS46_00095 (holB)
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_00095 (holB)
Enzymes [BR:
pthi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NDS46_00095 (holB)
DNA replication proteins [BR:
pthi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NDS46_00095 (holB)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NDS46_00095 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Dicer_PBD
Motif
Other DBs
NCBI-ProteinID:
WCF08394
LinkDB
All DBs
Position
22002..22982
Genome browser
AA seq
326 aa
AA seq
DB search
MSFQQIIGQERAKTLLQNGLRSGKVSHAYLFSGPKGTGRLQTAITFTKALFCENATDDAC
GECLSCRKIEHGNHPDVHVISPEGQSIKIDQVRELQREFAYRTQAEGRKVYIMEQAETMT
VQAANSLLKFLEEPMSPIVAILITDNGQAMLPTIQSRSQWVPFTPPDPQIIYNALIEEGC
SALLARAAVHLVNGIGEGRELCQQNWFAELRNVMLQLGKECGARLSSALLMAQQKVFKTE
LGEHTDMLFRLFHLWFRDMLNYQFNRQENLVFCDQLDAIGRLAWSKSAQGWIRCMAAAAE
AQKRVRANVSPQLAFEQFLVGVQGGT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcaacaaataatcggacaggaacgggcgaagaccctattgcagaacggtctg
cgttcgggtaaagtctcgcatgcgtatttgttcagcgggccgaagggaaccgggcggctg
cagacggcaattactttcacgaaggcgctgttctgcgagaacgcaacggatgatgcctgc
ggagaatgcttgtcatgccggaagatcgagcatggcaaccacccggatgtgcatgtgatt
tcacccgaaggacagagcatcaaaatcgatcaggtgcgggagctccagcgggagttcgcg
taccgcacgcaggcggaaggccgcaaagtgtatatcatggagcaggcggagacgatgacc
gtgcaggcggccaacagcctgctcaaatttttggaagaaccgatgagcccgattgtcgcg
atcctgattacagacaatggacaagcgatgctgcccacaattcaatcgcgctcgcaatgg
gtgccttttaccccgccggatccccagatcatctacaatgcactgattgaggagggctgc
tctgccttgctggcccgggcagcggttcatctcgtcaacggaataggggaaggcagggaa
ctgtgccaacagaattggtttgcagaactgagaaacgtaatgttacaattaggaaaggag
tgtggggcacgattgtcatccgcacttcttatggcacaacagaaggtgttcaagaccgag
cttggagagcatacggacatgttgttccgtctgttccacctctggtttcgtgatatgctg
aattatcaattcaaccgacaggagaacctcgtcttttgcgatcagctggatgcaataggc
agactagcctggtcgaaatcggcgcagggatggatccgatgcatggccgcggcagcagaa
gcgcagaagcgggtacgcgccaatgtcagtccgcagcttgcatttgaacagtttctggtt
ggagtgcaaggaggtacatga
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