Phaeodactylum tricornutum: PHATRDRAFT_19093
Help
Entry
PHATRDRAFT_19093 CDS
T01075
Symbol
COPIepsilon
Name
(RefSeq) hypothetical protein
KO
K17268
coatomer subunit epsilon
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_19093 (COPIepsilon)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_19093 (COPIepsilon)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PHATRDRAFT_19093 (COPIepsilon)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_19093 (COPIepsilon)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_E
TPR_2
TPR_19
TPR_14
ANAPC3
TPR_10
TPR_8
HrpB1_HrpK
TPR_16
TPR_1
TPR_7
TPR_9
Motif
Other DBs
NCBI-GeneID:
7197812
NCBI-ProteinID:
XP_002178331
JGI:
19093
UniProt:
B7FUJ7
LinkDB
All DBs
Position
4:947884..948892
Genome browser
AA seq
291 aa
AA seq
DB search
MTEPDELYTLRAQYWLGHYHMALEEAKSIARRPMNPNLKAEREEFLARAWIAQGHYDRVT
ATETPGLQALALKAQYEAATGNTAAQESILNQIKSLAAGGEASSVGLTAAQVLLVAGQTK
EALQLVHASSRMEDMLVCLQIYLKLDRLDLAKKSLQKLKQKDEDSILCQLAGVYVHLASG
SEGSADAVHSINSLTEQYGSSPLLANLMACALMQQGDYAGAEQALEECLREQSEIRLPDT
LINMICATTHQNKSAEQYVGQMQLEFPAHPFCAGLERVTAAFEREAIKYKV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccggatgaactctacacgcttcgagcgcaatactggctcggacactaccat
atggcgttggaggaagccaaatccatcgcgcgccgtccgatgaatccgaacctcaaggcg
gagcgcgaagaatttctcgcccgagcctggattgctcagggtcactacgaccgggtcacg
gcgaccgaaactcccggtctccaggcgttggccttaaaggctcagtacgaagctgcgacg
ggaaataccgccgctcaagaatcgattctcaaccagatcaagtcccttgccgctggcggc
gaagccagtagcgtcgggttgacagctgctcaggtcttgctggtcgctgggcaaaccaaa
gaagctttgcaacttgtgcacgcctcatctcgtatggaggatatgcttgtctgtctccaa
atctatttgaaactcgatcgcttggatttggcaaagaaatccctgcagaagttgaaacaa
aaagatgaagattcgattttgtgccagctggcaggagtttacgtgcatctagcgtcggga
tcggaaggatctgctgatgcggttcattcgattaactcgctgacggaacagtacggttcg
agtcctcttttggcgaaccttatggcttgtgccttgatgcagcaaggtgactacgcggga
gcggagcaagctctggaggaatgcttgcgagagcaatccgaaattcgcttgccggacacg
ctgatcaatatgatttgtgctacgacacatcaaaataaatcagcggaacagtacgtcggt
cagatgcaactggagtttcccgctcatcccttttgtgcgggccttgagcgtgtcacggcc
gcgtttgagcgagaagcaattaaatacaaggtgtaa
DBGET
integrated database retrieval system
