Phaeodactylum tricornutum: PHATRDRAFT_26061
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Entry
PHATRDRAFT_26061 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K06063
SNW domain-containing protein 1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_26061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_26061
Spliceosome [BR:
pti03041
]
Complex B
Other components
Prp19-related factors
PHATRDRAFT_26061
Complex C
PHATRDRAFT_26061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
7197853
NCBI-ProteinID:
XP_002178499
JGI:
26061
UniProt:
B7FTX4
LinkDB
All DBs
Position
4:complement(393640..395512)
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AA seq
552 aa
AA seq
DB search
MASLSLPPPRNMSEAPVVSRKATTEQSPEAPKADHSRQPDSAATTTSKPSPPSYAERCRA
ALALHTMPPEERRKNKLFVPRSLDDFGDGGAYPEIHVAQYPRHMGNPHRHSKHANASGGT
SRGAQAISKALVNVEIDKDGKVSYDAIVKGGTNSDKIVYSRHADLRGGSAKAEDIALPTE
EEEQSEAARTQAALDAILGKKTALDNPSGSAIVNAQTSQNVEAKTSFIKYTPRPDAPGYN
PAASQRVIQMVPAKVDPMMPPKHKHIKAPAGPAEDPVPVLHAPPSKLSKEEREAWNVPAC
ISNWKNTRGYTIPLDKRLAADGRGLREHTINTNFATLSESLYVAERQARQEVRIRAQVHK
KLALQEKDKREDELRQLANQARLERAAQGDTEDDVAARQREKLRLERKREREREMRMENN
MELKKQKLEQERDVSEKIALGVHTGTGGLGGDVDSRLYNQSAGMDSGFGADDEYNAYSKP
LFARQAAASSASIYRPTRGDTAYNADEQYSKLQQGATSKFQPDKGFSGAEGGVSGAGTTR
TAPVQFEKGDQK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctttctctcccccctccccgcaatatgtcggaagcgcctgttgtgtcccgc
aaagccaccacagaacaaagtccggaagccccgaaggctgatcactcgcgccaaccggat
tctgccgctaccactaccagcaaaccatctcctccctcctacgccgaacgatgccgggcc
gcgctcgcgctccataccatgccacccgaagaacgacgtaaaaacaagctgtttgtcccg
cgttcactggacgatttcggcgacggcggagcgtatccggaaattcacgtggcgcagtac
ccgcgtcacatgggcaacccccatcggcactcgaagcacgcgaacgcctcgggcggcacg
tctcgcggtgcacaggcaatatcgaaggcactggtaaatgtagaaattgataaagatggt
aaggtatcgtacgatgcgatcgtcaagggggggacaaactcggataagattgtgtattcg
cgacacgcggatttgcgaggcggatcagccaaagcggaggacattgcgttgccaacagaa
gaagaggagcaatccgaagcagctcggacacaagcggcactcgatgcaatattgggtaag
aaaaccgcgttggacaatccttctggcagcgcaatcgtcaacgcccaaacgtcccagaat
gtggaagcgaaaacatcctttattaaatacaccccacgacccgacgctcccggctacaac
cctgccgcttcacagcgagttattcaaatggtgccagccaaggttgatcccatgatgcct
cccaagcacaagcacattaaagctccggctggaccggccgaagatccggttccggtcttg
cacgcaccacctagcaaattgagcaaggaagaacgcgaggcatggaacgtacccgcgtgt
atttccaactggaagaatacccgaggctatacgattccgctcgacaaacgattggcggcg
gatgggcgaggcctgcgtgagcatacgatcaataccaattttgcgacgctttccgaatcc
ctgtacgtggcggaacgccaagctaggcaggaggtacgcatacgggcgcaagtgcacaag
aaattggctttgcaagaaaaagacaagcgggaagatgagcttcggcagctggcgaaccaa
gcgcgtctggaacgggctgcgcaaggagatacggaggatgatgtggccgcgcgtcagcga
gaaaaacttcgcttggaacgaaaacgggaaagagaacgagaaatgcgtatggaaaacaat
atggaactcaagaagcaaaagttggagcaggaacgtgacgtgtcggaaaaaattgctttg
ggggtacacacgggtacaggtggcttgggaggcgatgtggattcacgtctttacaaccaa
tcggcgggtatggattcagggtttggcgcggacgacgaatacaatgcgtattccaagcct
ttgtttgcacgccaagccgcggcgtcgtcggcatccatttaccgtccgactcggggcgac
acggcctataatgcggatgaacaatacagcaagttacagcaaggggctacctccaagttt
caaccagacaagggtttttctggggccgaaggtggtgtctctggggctggaaccactcgc
acagctcctgttcagttcgagaaaggcgatcaaaaatag
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