Phaeodactylum tricornutum: PHATRDRAFT_46080
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Entry
PHATRDRAFT_46080 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_46080
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_46080
Enzymes [BR:
pti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHATRDRAFT_46080
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PHATRDRAFT_46080
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PHATRDRAFT_46080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7201426
NCBI-ProteinID:
XP_002180388
JGI:
46080
UniProt:
B7FZZ6
LinkDB
All DBs
Position
9:189448..193661
Genome browser
AA seq
1370 aa
AA seq
DB search
MNSVLQQLFMMPELRDSMCSAPLPRSLRSSGGSTVLVGNDLVGKKISLQWDTGISYDAFV
EGFNDVTGMHIIRYCPIQIATVGGSTIHQIQPEDIDSLPPVLPEEFILTEGRSGMETGVY
DVVSDVSENLDGNEMSSKAINTIQETEDEKTSRHLLEEFQRTFIHLQEGSKGRCFDPRTL
VEACACLKLEFDVWQQNDASEFATKLLDRLEIALRRWAPEHFRYMDHTFGLKQTKQKICK
QCGMKSNREEKLLNIDCQIRGKSDIHEALAAMTDTELMEGSNKVFCDNCKVNTDTVLRTA
ISTLPNMLILSLKRFDLDYNTFETVKLNSRCAFGQTLNMKPYMLEGLEEAEQGAQGPSPM
ETEDANNSVDVNISPAGKDEDYEYKLAGVLVHAGVAQGGHYYSFIKDRNPGSEEKWYRFD
DEDVTPFDPAAIETECFGGKVKKETKWPNGQLHTIEQEQFANALMLFYEKVKSSDLPPPS
DNPMRQRDINTSVCSTGFDAFEPDVRRANATHRWQSFLFDAEFHAFLKGILGICRIGNPP
GNGGRDDWQKQCVPALLSFVFDVLLYSSDRSALNDWTQMLEEILLSNQEVSKSFVHHLAQ
KCDNVSDNWVRTFLLECPDQSSRQAAVRIFSAAFQSCARLESELKALADWTAAWKQQMEQ
LSVQQREANRLVALPCVLEREWKGFEDTNKLDGSASSMGKIISFLNVLLEALPRSFRFNA
EVFTFVRNLATMLLEGDENPFTLALIEALIPARLVTLAVRDRVASPLCLAFPGLSVPVEV
ARSQLRAESNASSHMMSMNTNHSLNGPDMNSIRGPTHSDLMALFEALVCILGLPGAVHVP
IVRDLEDLGRGRHKFALNETTVKALTAVFQECCSPGAPGMGQREIEIYLSRCDVDAANVS
KQKINDIMSKYPIAKCDHDLPGSNFLSLEGFLAYYEDTVQTNDVRVRADLHTFGFRPDLT
RRSRLSRLVPVRNQEKDRKPPESVAIDVAETFRDGFADLGRYGNLGLSSSPALFVLADSV
SEALSQYLIAAATYRRDTNSLTLATLQEIHRTPNDWNGSESIGASLNILMVIAATPDDDQ
DERISRIMSSQGKAARNVEYGAGILQVLRAFFRTRQAQQFSNEMRWGYERYVGLLKELRR
VYPVFVWMNNHRDQWSFVEREVLDSASRLQGKFRTEYVHRVPDHAIQSDHNSHADSDMAN
INDSDDDSQLSPADHYNGREISIPNSEANDGPYQIVVEGAGNSSVNGVYHQCGYFEGGCR
YAMSGNWRNERYRFFIFQCNVSNNTKHWYISIVPYDSQPGTSADIDFYTAPATSDFLRVP
PHTGWVKSQEGTDPLPRLTYKRLSSEGGTPERVLNGSVLEESDKSDSPYI
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgtacttcagcagttatttatgatgccagagctacgggattcaatgtgttca
gcccctttaccgaggtctctccgctcttcagggggctctacggttttagtcggaaatgac
cttgtcgggaaaaagatttcgctgcaatgggacacaggtatttcatacgatgcttttgtt
gaaggctttaatgacgtcactggtatgcacattatccgatattgcccgatacagattgcc
acggttggtggttccacaatacatcagattcaaccggaggacattgacagcctgcctcca
gtcctaccggaagagttcattcttaccgaaggacgctccggtatggaaaccggcgtctat
gacgttgtatcagatgtatctgaaaatttagacggcaatgaaatgtcctcgaaagcaatc
aacacgatccaagaaacggaggacgagaagacatcacgacacctgttggaagagttccaa
cgaacattcattcacttacaagagggatcgaaaggtcgctgtttcgatccacgcactctc
gtggaggcttgcgcctgtctaaagctggagttcgacgtttggcagcagaatgacgcttct
gaatttgccactaagcttcttgacagattggagatcgcattgagacgttgggcccctgag
cactttagatatatggatcatacctttggtttgaagcaaacgaagcaaaagatatgcaag
cagtgcggtatgaaatcgaatcgtgaagagaaactactaaatattgattgccaaattcga
gggaaatctgacattcacgaagcgttggctgcgatgaccgatacggagctaatggaaggg
agtaacaaagttttttgcgacaactgcaaagtaaacaccgatactgttttaaggacagcg
atctcaacgcttcccaatatgcttattttatcactgaagcggttcgatctggactacaac
actttcgagactgtgaaactaaacagtcgatgcgcctttggacaaactcttaatatgaaa
ccgtacatgttggaaggactagaggaagccgagcaaggcgcacagggaccttcacccatg
gaaacggaagacgccaataattcagttgacgtcaacatttcccccgctggcaaagatgag
gactacgagtataaactcgctggagtacttgtgcacgccggagttgctcaaggtggtcac
tactacagctttatcaaggaccgcaaccctggctccgaagaaaagtggtatcgctttgat
gacgaagatgtaactcctttcgatccagcagctattgagacggaatgcttcgggggcaaa
gtaaagaaagagacgaagtggccgaatgggcaactgcatactattgaacaagagcagttc
gcgaacgctctcatgcttttttacgagaaagtgaaatcttcagacttgcccccaccatct
gataacccgatgcgacagcgggacatcaatacttcagtttgctccactggcttcgatgcg
ttcgagcccgatgttcgtagagccaatgcaactcatcgatggcaatcttttctttttgac
gccgaatttcatgcctttttaaagggaattttgggaatttgccgaattggcaatcctcca
ggcaatggcgggagggatgattggcaaaaacaatgcgtgcctgcgttactttcttttgtg
tttgacgttcttctctattcgtccgaccggagtgcgctgaacgattggactcaaatgctg
gaagagatacttttgagcaaccaagaagtctccaagtcctttgttcatcatctcgctcaa
aaatgtgacaatgttagcgacaattgggttcgaacgtttctgcttgagtgccccgaccag
agctcacgccaggctgcagtgcgaatctttagcgctgcttttcaatcatgtgcacgactt
gaatctgagcttaaagcgctggcagattggaccgctgcttggaaacaacaaatggaacaa
ctatcggtgcagcaacgagaggctaatcggcttgtggctcttccctgtgtactagagaga
gagtggaaaggctttgaggatacaaacaaattggatggctccgcttcaagcatggggaaa
ataatatcttttctgaatgttttgttggaggctttgccgaggagctttcgtttcaatgca
gaggtctttacgtttgtgcgcaacttggctacaatgcttttggaaggtgatgagaatccg
tttactctcgctttgatcgaagcgttgattcctgcgagactcgtcactctagccgtgcgg
gatcgggtagcaagtccactctgcctggcttttccaggtctttcggtaccagtggaagtt
gcccgcagccagcttcgggcggagtcgaacgcgtcctcgcacatgatgtcgatgaatacc
aatcattctttgaacgggccagacatgaacagtattagaggcccgacgcattcggatttg
atggcactttttgaagcactagtgtgcattttgggtttaccaggggcagttcacgttcca
attgtgcgtgatttggaagatttaggaagaggcagacacaaatttgcactcaatgagacc
accgtgaaagcgctcaccgcagtctttcaggaatgttgttcaccgggcgctccaggcatg
ggccagcgtgaaatcgaaatctatctaagcagatgcgatgtcgacgcggcaaacgtgtca
aaacaaaagataaacgatatcatgtccaagtaccccattgctaaatgcgaccacgatctt
cctggcagcaattttttaagcctcgaaggtttccttgcttattacgaggacactgttcaa
acgaatgacgtacgcgttcgggccgacttgcacacatttggatttcggcctgatcttacg
agacgatcgaggctttcccggcttgtccctgtacggaatcaagagaaggatagaaaaccg
ccagagagtgttgcgattgatgtagcagagacgttcagagatggatttgctgatctaggc
cgctacggaaacctgggtttgagtagtagtccagctctatttgtgctcgccgacagtgtt
agcgaagcactttcccagtacctcatcgctgcagctacttaccgtcgcgacaccaatagc
ctcacgctggcgacgcttcaggaaatccatagaacgccaaatgattggaacggatcggaa
tccatcggcgcttcgctgaatattttgatggttattgcagctacaccggatgatgatcaa
gatgagagaatatccagaatcatgtccagccaaggtaaagctgcccgcaacgtagaatat
ggagcgggtattttgcaggttcttcgagctttctttcgtacacgtcaagcgcagcagttc
agcaacgaaatgcgatggggctatgagcggtacgtcggtttattgaaggaactccgtcgt
gtttatcccgtctttgtttggatgaacaaccatcgagaccagtggagttttgtagaacgt
gaagtgttggattcagcttctcgactccaaggaaaatttcgaaccgagtacgtccaccgt
gtacccgaccacgcaattcaatctgatcacaattcacacgctgattccgatatggcaaac
ataaacgattcggacgatgactctcagctttcgccggccgatcattacaacgggcgcgaa
attagcatccccaattccgaagccaacgatggtccatatcagattgtcgtggaaggcgca
ggaaattcttccgtaaatggtgtgtaccaccagtgcggctatttcgaaggtgggtgccgc
tacgccatgtcgggaaattggcgcaacgaacggtatcgcttcttcatctttcagtgcaac
gttagcaataataccaagcattggtacatctccatagttccctacgacagccagcccggt
acatcagcagacattgacttttacactgccccggcgacatctgatttcttgcgcgtgccg
ccccacactggttgggtcaagtcacaagaaggcaccgacccattaccacgcttgacttac
aaacggttatcttctgaaggcggtacgcctgagcgtgtgttgaatggatctgttttggaa
gagagcgacaaaagtgattctccgtacatctga
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integrated database retrieval system
