Phaeodactylum tricornutum: PHATRDRAFT_49563
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Entry
PHATRDRAFT_49563 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00511
Other glycan degradation
pti00513
Various types of N-glycan biosynthesis
pti00520
Amino sugar and nucleotide sugar metabolism
pti00531
Glycosaminoglycan degradation
pti00600
Sphingolipid metabolism
pti00604
Glycosphingolipid biosynthesis - ganglio series
pti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
PHATRDRAFT_49563
09103 Lipid metabolism
00600 Sphingolipid metabolism
PHATRDRAFT_49563
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
PHATRDRAFT_49563
00531 Glycosaminoglycan degradation
PHATRDRAFT_49563
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
PHATRDRAFT_49563
00604 Glycosphingolipid biosynthesis - ganglio series
PHATRDRAFT_49563
00511 Other glycan degradation
PHATRDRAFT_49563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_49563
Enzymes [BR:
pti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
PHATRDRAFT_49563
Chaperones and folding catalysts [BR:
pti03110
]
Intramolecular chaperones
Others
PHATRDRAFT_49563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
7198229
NCBI-ProteinID:
XP_002184293
JGI:
49563
UniProt:
B7GB18
LinkDB
All DBs
Position
23:52044..55519
Genome browser
AA seq
973 aa
AA seq
DB search
MESARSRNTRDGTRKQGTARRSGGTTSSNGNQGFDEFGFGQPAFPDSAFDNHGFEMPQTR
IQPTKIRSRRRASLAAAPNIDVVSENPSIGFTNQFQSSQDEQVSRGGARLAKAGRSSRSM
DGIEFPTARKDVSSQNRPRRSGRRASMATSSNHSLSASNHTNPELGYGDAIPSVAANHRK
GDSNSGILDFGFGGGKNAGTANADYGYGDTMSSGFGNFESMPSAPSTTPESERPRRSGRR
SSISGGLESLRSDLRGGDLSGAPSSRVLGGNSRAQNIVLPMAGPEKVAGGNVRRGRRGSL
LGSVGNAVGATMGGFTGGNKDKEKLDDDTTKKSKSFLKDRKAEGRRGTTRQPSADGNIIS
SYTGDRDRRRKPAASSKTLGKESNVSYSDRILAQRDCSCGGEGSSSSGSGSSDGSSACCR
SKIWPAARCETYRTLEIDASSSMTLRRHGLRGLHISPTQSVGDESSFDVDCHGYCQDVQS
ILDAAYVRFLKALRRSVSSTPLAHHDRRENEKVAQHDNVQALLGIHISITTNESALVHDA
DERYQLDVPGPTVTENDDDDDGSYIHLTAPTVYGILHAYQSLLQLVTFVGRDSQTGAFVF
AMPDTTLIRIRDGPVYPYRGLMIDTARHFLPLPLILQNLDAMEASKLNVLHWHVTDSQSW
PYVSTAFPELSARGAFGPEETYTATDIALVVREAAARAIGRSHPEWLTPCGSKPRPQEPL
DATNPAVYEFVHRLYDELAILFAHESFLHVGGDEVNLDCYHNSTTVQRWMRKHNMTQELE
VLSYFERDLLSYVTAVLNRRPIVWQELFDSGLGLPNQTIVDVWKSWEPSSRYNATLRGHE
VILSSCWYLDHLNEDWQSFYACDPREFNGTKEQKNLILGGHASMWGERVDATNFLSRVWP
RASATAEKLWTGNLTAAADSAASRLAAFRCHLVRRGIPASPVGPGASCGRQPNGFPAVID
SFHDEELQEGKVT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgctcgctctcgaaatacccgggatggcacccgaaagcaaggtacggcacga
agaagtggcggtactactagtagcaatggcaatcaaggcttcgacgagtttggatttggt
caacctgcctttccggattctgcgtttgacaaccacggctttgagatgccgcaaactcga
attcagccaacgaagattcgttcccgccgtcgagcatctttagctgcggcgccgaacatt
gacgttgtgtcggaaaacccgtcaataggttttaccaatcaatttcaatcttcacaagac
gaacaggtgtctcgtggtggagcccgcttggcaaaggcgggacgctcatcgcgctcaatg
gacggcatcgaattcccaactgcacgcaaggacgtttctagtcaaaatcgtcctcgtcgt
tcgggtcgccgggcttcaatggctacttcttccaaccacagcctttccgcttccaatcac
accaacccggaactcggttacggagacgccattccgtctgttgctgctaaccatagaaaa
ggagactctaatagcggaattttggacttcggctttggtggtggtaagaatgccggtaca
gccaatgccgactacggctacggtgacacaatgtcgtcgggttttggtaatttcgagtct
atgccatccgcgccttccaccacacccgaatctgaacgtccgcgtcgcagcggacgacgc
tccagtatcagtggaggtcttgaaagtctacggtctgacttgcgcggaggcgacctgagt
ggtgctccgtctagtcgggtgttgggtggaaattctcgcgcccagaacattgtgttgccc
atggccgggccggaaaaagtggccggtggcaatgttcgtcgtggacgtcgcggatcctta
ctgggtagtgttggtaatgcagtcggagctaccatggggggattcactggtggaaataag
gacaaggaaaaactcgacgacgataccaccaaaaagtctaagtcttttctaaaggatcgc
aaggctgaaggtcggcgaggcacgacacgtcaaccatcggccgatggcaatataatctct
tcctataccggcgatcgcgaccgacgccgcaagccggcagcgtcgtccaagaccctgggc
aaagagagcaacgtgtcgtactcggatcgtattttagcacagcgtgactgtagttgtgga
ggtgaagggagcagcagtagcggtagcggtagcagtgacggtagtagtgcttgttgtcgc
agcaaaatttggccggcggctcgatgtgaaacctaccgaacactcgaaatcgatgcttcc
tcctctatgacattgcgacggcacggcttgcgaggactgcatatctcccctactcaaagc
gtaggggacgaaagtagcttcgatgtggactgccatggatattgtcaagacgttcaatcg
atactggacgccgcgtacgttcgctttctcaaggcgctccggcgaagcgtgtcttccacg
cctttggcgcatcacgaccgtcgcgaaaatgaaaaggtcgctcaacatgacaacgtacag
gctctgttgggcattcacatttccattactacgaatgagtctgcactcgtacacgacgcg
gacgaacgataccaactggacgtcccagggcctaccgtcactgaaaacgacgacgacgac
gatggcagctacattcatctcactgcacccaccgtctacggcattctgcacgcctaccaa
agcttactgcagctggtgacgtttgttggtagggactctcaaacaggcgctttcgtattc
gccatgccggacacaaccctcattcgaatccgtgatggacccgtgtatccctaccgggga
ctcatgatcgacacggcccgacattttttgccactaccgcttatcttgcaaaacttggac
gccatggaggccagtaaactgaacgtcttgcactggcacgtgactgattcgcagtcgtgg
ccctacgtcagtactgcttttccggagcttagtgctcggggagcctttggtcctgaagaa
acctacacggctacagatattgccctcgtcgtgcgggaagccgccgcacgggcgattgga
cgctcacatccggaatggttaacaccctgtgggtccaagccacggccgcaagaacctttg
gatgcgaccaatccggccgtctacgaattcgtacaccgcctctacgacgaattggcaata
ctctttgcgcacgaatcctttttacacgtcggaggagacgaagtcaatttagattgttac
cacaatagcacgacggtccaaagatggatgcgaaaacacaatatgacacaggaacttgag
gttctgagctattttgagcgtgatttgctttcgtacgtcaccgctgtattaaatcgtcgt
cccattgtgtggcaggaactcttcgattcgggattgggtcttcccaatcagacaattgtc
gatgtctggaaatcgtgggaaccttcgtcgcgatacaacgccactttgcggggccacgaa
gttattttgtcctcgtgctggtatctcgatcatttgaacgaagattggcaaagcttctac
gcctgtgatccacgggagttcaacggtacgaaagaacagaagaacttgattctgggcggt
cacgcttccatgtggggggaacgggtggatgcgaccaactttctatctcgtgtttggccc
cgtgccagtgctacggccgaaaagctgtggacaggcaacttaacagctgcggcggattcg
gcggcttctcgattggccgcctttcgctgtcatttggtccgcagaggaattccggccagt
ccggtcggtccgggagcaagttgcggcagacaaccaaatggttttccggctgtgatcgat
agctttcatgacgaggagttgcaggaaggaaaggttacttga
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