Phaeodactylum tricornutum: PHATRDRAFT_50135
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Entry
PHATRDRAFT_50135 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_50135
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pti01001
]
PHATRDRAFT_50135
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_50135
Enzymes [BR:
pti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
PHATRDRAFT_50135
Protein kinases [BR:
pti01001
]
Serine/threonine kinases: Other
RIO family [OT]
PHATRDRAFT_50135
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-40S particles
Kinases
PHATRDRAFT_50135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
Pkinase_fungal
Tam41_Mmp37
Motif
Other DBs
NCBI-GeneID:
7198933
NCBI-ProteinID:
XP_002184976
JGI:
50135
UniProt:
B7GD28
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All DBs
Position
27:155229..157421
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AA seq
626 aa
AA seq
DB search
MATMAAANVITGQFDDADSDEEDFVARMQAQRQPATLPVQSSKLACVSSFTRPPVESLQT
YYDWDDAPLTSVAAQSVAQASAASSKQMNLSHAVSNRVTQMEHLETHKRTLTQGRDDRAT
SEQVLDPRTRLILFKLLSRGFLEAIDGCLSTGKEANVYYAKAGKHHLQPQRYDATPTPTD
EDNCDNTKPRHVTEYAIKIYKTSILVFKDRDKYVAGEHRWRKGYCKSNPRKMVKVWAEKE
MRNYRRIYAAGIPCPEPILLKAHVLVMEFLGVGGWPSPRLKDAALSDKRLREAYVQCVLI
MRHLYQRCKLVHGDLSEYNLLWHENQIYVIDVSQSVETDHPSALDFLRKDASNVNDYFRK
VGRLNVMTVRQLFEFVTASVLPCDQPNVATEQAELASLDAIMQHVDQTALQLAETSEQGQ
RKVEQQEAVDEAVFMSSFLPRSLNQVAEHEIQKLATGEVEDTYAQAVASLTGNRDVVEAV
AKKLGRNDFMTKSVQSILTNASSRESPQEEERKAGGKNGVHFSAVLDEKGDKSPSRQSGE
DEFMSECDDDSSVDSEGESVDKEIGFVKTPMTPEEFTAMKEAVRTERRANKKAVKDAKSE
QRQNKVKKKDKKRAIKKSKAGNRKNK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatggccgccgcaaacgtgataacgggacagttcgacgatgccgacagtgac
gaagaagactttgtcgcccgcatgcaagcacaacggcagccagcgacgttgcccgtccaa
tcctcaaaattggcatgcgtttcttcgttcacccgaccacccgtcgagtctttgcaaact
tattacgattgggacgatgcaccgctcacgtccgttgcggcacagagtgtggcgcaagcg
tccgccgcatcatccaagcaaatgaatctgtcgcacgccgtatccaaccgtgttacgcag
atggaacacctcgaaacgcataagcgtaccttgacacagggtagggacgatcgggccacc
tcggaacaggtactcgatccccgaacgcgactcatactcttcaagttactcagccgtgga
ttcctggaagccatcgatggatgcctgtccaccggcaaggaagctaacgtttactacgcc
aaggctggtaaacatcatctgcaaccgcaacggtacgacgccacgcctacgcctaccgac
gaggacaattgcgacaacacaaaaccccggcacgttaccgaatacgccattaaaatatac
aaaacgagcattctcgtattcaaagaccgcgataagtacgtcgcgggcgaacatcgctgg
cgcaagggttactgcaaatcaaatccgcgaaaaatggtcaaggtctgggcagaaaaagag
atgcgcaactaccgtcgcatatacgccgccggtattccctgtccggaacccatcttgctc
aaagcgcacgtactcgttatggaattcctcggtgtcggcggttggccctcccctcggctc
aaggacgccgcgctttccgacaagcgcctccgggaagcctacgtacaatgcgtactcatc
atgcgacacttgtaccaacggtgtaaactcgtacacggcgatctgtccgaatacaacctc
ctctggcacgaaaaccaaatttacgttattgacgtaagtcagtccgtggaaacagaccac
ccctcggcgttggatttcttgcgcaaggacgcctccaacgtcaacgattactttcgcaaa
gtcggacgactcaacgtcatgacggtccgtcagttgtttgagtttgtcacggcatcggtt
ttgccgtgtgaccagccgaacgtcgcgacggagcaagccgaattggcgagtctcgacgcc
attatgcaacacgtggaccaaaccgcactgcagttggcggaaacatcggaacagggacag
cgcaaagtagaacagcaagaggccgtggacgaagccgtctttatgagcagctttttgccg
cggagcctcaaccaagtagccgagcacgaaattcaaaaactggcaaccggggaggtggaa
gacacctacgcgcaagccgtcgcgtccttgacaggcaatcgcgatgtggtcgaagcggtc
gcgaaaaagttgggccggaacgacttcatgacaaagtcggtccaatccattctgactaac
gcatcgtcgagggaatctcctcaagaagaggagcgaaaagccggagggaagaatggagtg
catttttcggcggtattggacgagaaaggcgacaaatcgccaagtaggcagagtggggaa
gacgagttcatgtccgaatgtgacgatgacagttctgtagatagcgagggtgagtccgtg
gacaaagaaattggtttcgtcaagactcctatgaccccggaagagtttactgccatgaag
gaagctgtaagaacggagcgccgagcaaacaaaaaagccgtcaaagacgcgaaaagcgaa
cagcgtcagaacaaggtgaaaaagaaggataagaaacgagccattaaaaaatcgaaggcc
ggaaatcgaaagaataaatag
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