Phaeodactylum tricornutum: PHATRDRAFT_54478
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Entry
PHATRDRAFT_54478 CDS
T01075
Symbol
MS
Name
(RefSeq) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00620
Pyruvate metabolism
pti00630
Glyoxylate and dicarboxylate metabolism
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
PHATRDRAFT_54478 (MS)
00630 Glyoxylate and dicarboxylate metabolism
PHATRDRAFT_54478 (MS)
Enzymes [BR:
pti01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
PHATRDRAFT_54478 (MS)
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
Motif
Other DBs
NCBI-GeneID:
7201080
NCBI-ProteinID:
XP_002180227
JGI:
54478
UniProt:
B7FYT9
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Position
8:complement(403450..405322)
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AA seq
553 aa
AA seq
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MIEFRSEQVHVRVHAPANKAAEEMLTPDALRLLGLLCERFDVRRQALLAARKTHATSFDA
GDVPHFLSAEDHPAQRDPHWRCAPVPDDVQDRRVEITGPVDRKMVINGLNSGACVYMADF
EDSTSPTWFNVIDGQLNLRDAVRGTIAFTNAAGKVYTVQHASRPATLFVRPRGWHLDEAH
VTVNGKVASGSLFDFAMYFFHNVHHLKEKGTGPYFYLPKLESHKEAALWNDVFVAAQQFM
GVPIGTIRATVLLETITAAFEMEEILYELRDHSLGLNCGRWDYLFSFIKKFKHHTDKLTP
DRNHLTMTTPLMEAYVKRLIYICHKRGTFAMGGMSASIPIKNDPAANDAAMQKVADDKLR
EVTAGHDGSWVAHPALVKVAKDVFDEHMLTPNQITSKPGYVGSSINEQDLLRLPPIPHGK
AITSEGLARGVGIVLAYTEAWLRGIGCIPLHNAMEDAATAEISRAQIWQWRSQKASTQDD
NRPITASRVAALVQQEVDRQCNGVAGKSKGKWRLAGNLVENMLNKDELDDFLTSVCYPHI
VTTAYDDGRIAKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttcgttcggaacaagtacacgttcgcgtgcacgcgcctgccaacaaggcc
gccgaagaaatgttgacgccggatgcgctacgtttgctcggactgctttgcgaacgcttc
gatgtccgtcggcaggctctacttgcagcccgcaaaacccacgccactagctttgatgct
ggtgatgttcctcactttctgtcggcagaagaccatcccgcccagcgagatccccactgg
cgctgtgctcccgtccctgacgacgtccaggatcgtcgcgtggaaataacgggaccagtg
gatcggaagatggtcatcaacgggttgaatagtggagcatgtgtgtacatggcggacttt
gaagactccacaagccctacatggtttaacgtgattgacggacagttgaatttgcgcgac
gcagtccgcggtaccatcgcgttcaccaacgctgccggaaaggtgtacacagtgcagcat
gcgagtcgtccagccacgctctttgtccgtcctcgtggctggcatttggatgaggcacac
gtcacggtcaacggcaaggtcgcgtcggggtccctcttcgattttgccatgtactttttc
cacaatgtacaccatttgaaggagaagggtaccgggccctatttctatttgcccaaattg
gagtctcacaaggaggctgctctatggaatgatgtctttgtcgcagcgcaacagtttatg
ggagtgcctatcggtaccattcgggcaacggttttgttggagacgattacagctgctttt
gaaatggaagagattctgtacgaactgcgtgatcattctctgggtttgaattgcggtcgt
tgggattatttattttcgttcattaaaaaatttaagcatcatacggacaagttgactccg
gatcgaaatcacctgaccatgactacgcccctgatggaggcgtacgtcaagcgactcatc
tacatttgtcacaagcggggaacttttgcaatgggcggtatgagtgcatcaattcccatc
aagaatgatccagcagccaacgatgctgccatgcaaaaggttgccgacgataagttgcgc
gaagtgacagctggacacgatggctcctgggttgctcatcccgccttggtcaaggtggct
aaggatgtgtttgatgaacacatgctgactccgaatcaaattacatccaagccgggctat
gttggatcctccataaacgagcaagatctgctgcgcttgccaccgatcccgcacggaaaa
gccatcacaagtgagggtctagctcgaggcgttggtatcgtattggcgtataccgaagcc
tggttgcgcggcatcgggtgcattcccttgcacaatgccatggaagatgccgctacggca
gaaattagccgagcccaaatttggcaatggcgcagccagaaagcgtcgacacaagatgat
aataggccaatcacggcgtctcgtgtggccgcattggtacagcaggaggtagaccgtcaa
tgcaatggtgttgctggaaagtccaagggcaaatggcgacttgccggtaatttggtggaa
aacatgctcaacaaggatgaattggacgactttttgacatctgtttgctatccacacatt
gtcacaacagcatacgatgatggtcgaatcgccaagctgtag
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