Phaeodactylum tricornutum: PHATR_46779
Help
Entry
PHATR_46779 CDS
T01075
Name
(RefSeq) hypothetical protein
Organism
pti
Phaeodactylum tricornutum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AglB_L1
Motif
Other DBs
NCBI-GeneID:
7204654
NCBI-ProteinID:
XP_002185885
JGI:
46779
UniProt:
B5Y3R4
LinkDB
All DBs
Position
11:complement(428435..434227)
Genome browser
AA seq
1777 aa
AA seq
DB search
MKEPPASPQQPSSPRNLFFRRPRQKRNPLSRPYDDEVGVILTKLLNQSRTFSYNSSSKAQ
PDSEHTFVVPPFLSKHNGRILHCRINRWRQIPPSRLWASLKELLYATHAYLWQPQNQPSR
RNVFLLTATVLFFLYCLGVALVHAVIAYGAQTICAVSSGFFVLLLDHDEAEKACPNAIKE
LATCFQRGVHSLDNFLQVHRFAGREWNKLDMEWDRASNAASTRTRLWDLPPPTIHTTGQR
IDPEFSVRPEWGDATAHHHAAINFCYAMLREEQLSKASTSNRQQKKASQASSVILHEKVP
LILSETPKRSKSSGLINERDWGSDSIAKNKRASRSVVTVMSTNLRQPFPELASIKSLIEE
FEVKVGDRTTPKSQIGDYADEPLNSCRVLEEDTLSELRSDVQSVGSDVAGDLPWIDVGAK
IGMSLLNSAHLQRALVSREAKDCFMERLGREGGNASLSDMASSIAGAVSDTGSAGLDTND
IVKQPPKPTHSMWSSPAIVVADTGEESPHCSASSLCDVDPMYNFDDSAKEDLSSPTLSPT
PSIPIDLLLQKPRSSIYPRPFFGRTSNATRSCAKHFSTGERSPSKESKGTKQFSPNLTNM
HVKQMKGWFSGQEVPLPAGSDNYVRELDAPSCVGTVVVSSEDASNTTDRNRRRLPLQRGI
KVAVPVFPNQPRAKGSEKRLSQANYQMGTVMCSERIFVGSLRASLERFTGETNCLSVTVQ
LDRSFLRNGEFAELTLRVLDSWTSRYMPRHSKVPLGSCVVSSFGIGVLAGWRAEDDCHVV
RSLWQRRGSGAAHAYLNRSAIYGTIEAGIGFRVETRFGWGTTQAYVKVGRDFLSGSYLVK
IGEEGRMKGHIIEIARPGILSCHGAQFIPVIEHLREAANFQIQVDNYNAAFRERCLDNTR
QESDKSFWRSWSKCGELFWNSFLKAAEEDRGFDRGVNEFMSDLISFLDRLDINQTDPNLA
LDHCISNDFEVECVVRDENEPLVEEKKDTQEPGFWIINDILGGVFKRPDQESDRIVEDNE
SFELDAASANAQYYERAFGVIQTLMKTVSIARAASTEHPHFRLALAIGYDFLLFVRTLVK
VQRKNMSGQSLMIWKRALNEIASTFGPITQRIERIGRGIAARMEKQGRKAKVRTLKFVDI
ILGDERLLFALEQGEWTQCATRLEIAFVKSQIIPEECVLHYRKMVRFLVNHIQTAMANNG
GAAERNNEKIVLLAQIVQWIAAPRRSVLKFFRDDNVLELFERILVRVFRKEELASRMLMI
HASNFQSLRHFRMLKDFSTSGRLWIPLLDAADEEFSWMAAHVPESAKGFMCSLSNLFSLC
VAQFHRINAGDLSMDWLDFLLEDDAVRIVHDIDIKLILALEAFSRDVKEMMAIVPYYASI
DDDILNLMDEVDVDEFLKEGVEAMEDPEKLSQFIREKSTIAIERFLNYLPKMSIPVEKRE
LGEGWMLTCHGKDGGDLTLSDVKIRRKNLICQVIGGDSLFFPMFGDDDVDDASVSVPDDI
NPLFSPSGCIEESILDHIRGILLEAQRQGCWQAGFGGVEKPPTDRYVAAVLHNLPISSVL
NCAIELWRNLEIDDDELLEIAIRDVSYQIELHQERKDETNKERSKKSCADISRHEECLRC
PNPLKTPSFDTVRRRFNPRLDPTVLYLEMNKLSLKLDKFLFLIEKKARNIFDPLFEGQGI
DEMSPILLLKDLEVSLDRVQLKVQDTGFGSDWILNKAVHVFEANITRVVADNLRDQIEEQ
AKNAIENLNSYFLVNPNMLLNILDVTMDDLDERVVFV
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcctcccgcatcgccccagcagccatcatctcctaggaatctctttttcagg
cgaccaagacaaaagcggaatccactttcgcgcccctatgacgacgaagtcggggtgatt
cttacgaaactattaaatcaatcgagaacgttttcctacaattcgtcctcaaaagcgcag
cccgactccgaacacacattcgtagtacctcctttcttgtcgaaacacaacgggagaatt
ttgcattgccggataaatcgttggcgacaaataccgccttctaggctttgggcctcactc
aaagaattgttgtatgccacacacgcttacctgtggcaaccacagaaccagccctcccga
cgaaacgttttcctgctaacggctaccgtgctattttttctttattgtctgggagtggct
ctggttcatgccgtgattgcatatggtgctcaaactatctgcgctgtgtcttctggtttc
ttcgttctacttttggaccacgatgaggcagagaaggcctgtccgaacgcaatcaaagaa
ttggctacctgtttccagcggggtgtccattcactggacaacttcctccaggtacatcgt
ttcgctggacgggaatggaataaattggatatggaatgggaccgcgccagcaatgccgca
tccacccgtacgcgcctctgggatctacctccacccacaattcacacgacgggacagcgc
atagatccagaattttcggtacgtcccgaatggggtgacgcaaccgctcatcatcacgct
gcaattaatttttgctacgcaatgttgcgcgaagaacagttgtcgaaggcctctactagc
aatcggcaacagaagaaagcttcccaggcttcgagtgtgattttgcatgaaaaagttccc
ttgatactctcagaaactccaaaacgctcaaaatcatcaggactgattaatgaaagagat
tggggcagcgactctattgcgaaaaacaaaagagcatccaggtctgttgtaacggttatg
tcaacaaacctgcgtcaaccgtttcctgagctggcttccataaagtccctcatcgaagaa
tttgaagtaaaggtgggtgatcgcactacaccaaaatctcaaataggggattatgcggac
gagcctcttaactcttgtcgtgttttggaagaagacactctgtcggagctacgctctgat
gttcaatctgtggggtctgatgttgccggggatctaccctggatcgatgttggtgctaag
atcggcatgagtcttttgaattcggcgcatctccagcgcgcactagtgtcccgagaagca
aaagattgttttatggaaaggctaggacgggaaggcggcaacgcgagtttaagtgatatg
gcgtcatcaattgctggggccgtttctgatactggctcggctgggttggatacaaacgac
attgtcaaacaacctcccaaacccacacactccatgtggtcatcacccgcaatcgttgtt
gccgataccggggaagagagcccacattgttcggcttcaagcctctgtgatgttgatccc
atgtacaatttcgatgattccgcgaaggaggatctttcatctccgactttgagcccaacg
ccttcaatacctattgacctacttctgcagaagccacgtagttctatatatccacggcct
ttctttggccgaacgagcaatgcgactaggagttgtgcaaaacatttttcgacgggggaa
aggtcaccgtcaaaggagtcgaaagggactaagcagttctccccgaatttaacaaatatg
catgtaaagcagatgaaaggttggttttcgggccaagaggtgccattaccagctggaagc
gacaactacgtgcgagaacttgatgctccgtcttgcgttggtaccgtggttgtttcttcg
gaagatgcatcaaatactacggacaggaatcgtcggcgtcttccattacagagaggaata
aaagtcgccgttcccgtatttccgaaccagccgagggcaaaaggctccgaaaaacgttta
agtcaagcaaactatcaaatgggaacagtaatgtgtagtgagcgcatctttgttgggtcg
ttgagagcttccctcgaaagattcactggcgagaccaattgcctttcagtcaccgtacag
ctcgacaggtcatttcttcgaaacggcgagtttgccgaactcacgttgcgcgttttggac
tcgtggacctcacgatacatgccgcggcattcgaaggtccctttgggaagttgcgtggta
tcttcttttggtattggtgtactcgctggctggagagcagaagatgactgtcacgtcgta
cgttccttatggcagagacgcggtagcggcgctgcccacgcttacttgaatcgaagcgct
atttatggtacaattgaggccggaatcggatttcgagtggagacgagatttgggtggggg
accactcaggcctacgtcaaggtcgggcgtgattttttatcgggaagttatttggttaaa
atcggtgaagaaggccgtatgaagggccacatcattgagatcgcaagaccaggtatttta
tcttgccacggagctcaattcattccggttatcgaacatcttcgcgaagccgcaaacttc
cagattcaagtcgacaattacaacgcagctttccgtgaacggtgtcttgataacactaga
caagagtctgacaaaagcttttggcgttcttggtccaagtgcggcgaacttttttggaac
agttttctgaaagcagcagaggaagaccgtggctttgaccgaggcgtgaacgaatttatg
agtgaccttatcagctttctcgatcgtcttgacataaatcaaaccgatccaaatttagca
ctagatcattgtatctcaaatgactttgaggttgaatgcgtagtcagagatgaaaacgaa
ccgttggttgaggaaaagaaagacacacaggaacctggcttctggatcattaatgacatt
ctaggcggagtcttcaaacgcccggatcaggaaagtgatcgcattgtcgaggacaatgaa
tcgttcgaacttgatgccgctagtgcgaacgcacagtattacgaacgtgcttttggagtt
atacaaacattgatgaagacggtctcaatcgctcgtgctgcaagtacagagcacccacat
tttcgcctggcattggcgatcgggtatgattttcttctcttcgttcgcaccctcgtcaag
gtgcagagaaaaaacatgtctggtcagtccttaatgatatggaaacgagcattaaatgaa
atcgcatcaacttttggaccgattacacaacgaatcgagagaattgggagaggtattgca
gcccgaatggaaaagcaagggcgtaaggctaaagtacgaacattgaaattcgttgacatt
attctgggtgacgagaggttgctgttcgcacttgaacaaggggaatggacacaatgtgca
acaagactcgaaattgcatttgtcaagtctcaaatcattcccgaagaatgcgttttgcac
taccgaaaaatggttcgatttctggtcaatcacatccaaactgctatggcaaacaatggc
ggcgctgcggaacggaataacgaaaagattgtgctgctagctcagattgtgcaatggata
gcagcacctcgacgctctgttctaaagttctttcgcgacgataatgtcctcgaactattt
gagaggattcttgtccgcgtatttcgaaaagaggaattagcgtcccggatgctaatgatt
cacgcctcaaactttcaatcacttcgtcatttccgcatgctgaaagatttttcaactagt
ggtcgtctttggattcccttgcttgacgcagcagacgaagagttttcttggatggccgcc
catgtaccggagagtgccaaaggttttatgtgctcgctgtcaaaccttttttctttgtgc
gttgctcaatttcaccgtataaatgccggagacttatcgatggactggttggactttttg
ctagaagacgatgccgtacggattgtccatgacattgacatcaaactcatcctcgccctc
gaagctttctcgcgtgatgtaaaggaaatgatggcgattgtaccttactatgcaagtatc
gatgacgacatactgaacttgatggacgaagtggatgtcgacgagtttttgaaagaagga
gtagaggcgatggaggatccagaaaagctttcgcagtttattcgagagaagtccacaatc
gccatagaaagatttttgaattatctgcctaagatgtccattcctgttgagaaacgagaa
ctaggagaaggttggatgctgacttgtcatggaaaggacggtggcgatttaactttgtca
gatgtgaaaatcagacgcaaaaacctgatttgccaggtcataggtggggattccttgttc
ttcccaatgtttggagatgacgatgttgacgatgcttccgtatccgtcccagacgatatc
aatccactcttttcaccaagtggttgtattgaagaatcaattcttgatcatatccgaggg
attcttctcgaagcccagcgccagggttgctggcaagcaggcttcggtggcgttgaaaag
ccgcctacggatcgttacgttgctgcggttcttcacaatttacccatctcttctgtcttg
aactgcgcaattgagctgtggagaaatttggaaattgacgacgacgagcttcttgaaatt
gccataagagacgtctcgtaccaaattgaactccaccaagaacgtaaagatgagacaaac
aaggaaagaagcaaaaagtcttgtgctgatatctcgcgtcacgaagaatgcttacgttgt
ccaaatccattgaagacgccgtccttcgataccgtccgccgtcgtttcaacccccgtcta
gatccaactgttctctacctcgagatgaataagctttcgctgaaactcgacaagtttttg
tttcttatcgagaaaaaagcaagaaacatttttgacccgttgtttgagggccaaggaatt
gacgagatgtcacctattcttctgctaaaggatcttgaagtgtctctcgaccgtgttcag
ctaaaagtacaggacacagggtttgggtcagattggatattgaacaaagcggtccatgtt
ttcgaggcaaacatcacccgtgtagttgcagacaatttgagagaccagatcgaagagcaa
gcaaaaaacgcaattgaaaatctcaattcttacttcttggtcaacccaaatatgctactg
aatatattggatgttacaatggatgatctggacgaacgtgttgtgtttgtttag
DBGET
integrated database retrieval system