Paenibacillus tianjinensis: JRJ22_23240
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Entry
JRJ22_23240 CDS
T07842
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj00521
Streptomycin biosynthesis
ptj00523
Polyketide sugar unit biosynthesis
ptj00541
O-Antigen nucleotide sugar biosynthesis
ptj01100
Metabolic pathways
ptj01110
Biosynthesis of secondary metabolites
ptj01250
Biosynthesis of nucleotide sugars
Module
ptj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JRJ22_23240 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JRJ22_23240 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JRJ22_23240 (rfbC)
Enzymes [BR:
ptj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JRJ22_23240 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSF44107
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All DBs
Position
complement(5009183..5009743)
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AA seq
186 aa
AA seq
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MKLTETMLPGVFIVEPAVFGDHRGWFMETFSDAKFKEQGIDTAFVQDNQSYSAAKGTLRG
LHYQLNPKAQTKLVRCTRGSIFDVAVDIRRGSPSYGKWYGVELSAENKKQLLIPKGFAHG
FMTLTEDVEVQYKCDELYAPECDGGILWNDPSIGIEWPIHVTPVLSGKDEKAPLLREANL
NFTYDL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacggaaacgatgcttccaggcgtatttattgtagagcctgctgttttcgga
gatcatcggggatggtttatggaaaccttcagtgatgccaaattcaaagagcaaggtatt
gatactgcttttgtacaagataatcagtcctattctgctgcgaaagggacgctgagaggt
ctccactaccaattgaatcccaaagctcagactaagcttgtccgttgtacgcgtggttct
atttttgatgtggcagtggatattagaagaggaagtccctcttacgggaagtggtatggg
gtagagcttagtgcagagaataagaagcagctactgattccaaaagggttcgctcatggt
tttatgacgcttaccgaagatgttgaggttcaatataaatgtgatgagctttatgcgcct
gaatgcgacgggggaattctttggaatgatccatctatagggattgaatggcctattcat
gttactccggtactttccggcaaagatgagaaggctcctttactgagagaggctaatttg
aattttacttatgatctttag
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