Pseudomonas tructae: EXN22_05950
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Entry
EXN22_05950 CDS
T07857
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptk
Pseudomonas tructae
Pathway
ptk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXN22_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptk03021
]
EXN22_05950
Transcription machinery [BR:
ptk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXN22_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
DUF6031
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QBF25254
UniProt:
A0A411MEW8
LinkDB
All DBs
Position
complement(1305740..1306249)
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AA seq
169 aa
AA seq
DB search
MDTPKSWQRDVEHLYLEYNGWLRNWLRKRLSESADADDLAQDTFLRVMRTHQPLNELRQP
LAYLATIANGLLVNRWRRQAVERAYIEALAAQPEAVALSAEDQYLLIETLVEVDALLHGL
SPRAREIFLLSQLDGLTYRQIAAQLGLSIDQVQKSMSKAFALCYASQFE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcccaagtcttggcagcgggatgtcgaacacctttatctcgagtacaacggc
tggctacgcaattggctgcgcaagcgcttgagcgaaagcgccgatgccgacgatctggcg
caagacaccttcttgcgggtgatgcgcacgcatcagccactcaacgagttgcgccagccc
ctggcgtacctggccaccatcgccaatggcctgctggtcaatcgctggcggcgtcaggcg
gtggagcgggcttatattgaagccttggcggcgcagcccgaagccgtggccttgtcggcc
gaagaccagtacctgctgattgaaaccctggtggaagtcgatgcgctgctgcacggcctg
tcgccgcgggcgcgggagattttcctgttgtcgcaactcgatggcctgacctaccggcag
atcgccgcgcaactgggcctgagcatcgaccaagtgcaaaagtccatgagcaaggccttt
gccttgtgttacgccagccagttcgaatga
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