Pseudomonas tructae: EXN22_16085
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Entry
EXN22_16085 CDS
T07857
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptk
Pseudomonas tructae
Pathway
ptk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXN22_16085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptk03021
]
EXN22_16085
Transcription machinery [BR:
ptk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXN22_16085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
HTH_23
HTH_24
HTH_40
HTH_20
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QBF27138
UniProt:
A0A411MK46
LinkDB
All DBs
Position
3572300..3572818
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AA seq
172 aa
AA seq
DB search
MPAEPSSLCVAVGNLYVEHSPWLRGWLRKRMGNHSDAADLVQDTFVKIIKARSALEIREP
RVYLTTVAKGLMIDLFRRRSLEQAYLDTLASLPAAQVPSAEAQTVLFQTLVELDRLLAGL
GARVREVFILSQLDGKTYSQIAGQLGISLRSVNNHMAKAMEHICLLQWQSCE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgagccatccagcctctgcgtcgcagtcggcaacctctacgtcgaacatagc
ccgtggttacgaggctggttacgcaaacgcatgggcaatcacagcgacgcagctgaccta
gtccaggataccttcgtcaaaatcatcaaggcccgcagtgcgctggagatccgtgagccc
cgggtctacctgacgaccgtggccaagggcctgatgattgacctgtttcgtcgtcgttca
ctggaacaggcctacctcgacaccctggcaagcctgcccgctgcgcaggttccgagtgct
gaagcgcaaaccgttctgttccagaccctggttgagctggatcgcctgctggccgggctt
ggcgcccgggtacgcgaggtgttcatactgtcgcaactggacggcaagacctactcccag
attgccggccaactgggcatttccctgcgctcggtgaataaccatatggccaaagccatg
gagcacatctgcctgctgcaatggcaatcctgcgaatga
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