Purpureocillium takamizusanense: JDV02_002902
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Entry
JDV02_002902 CDS
T08929
Symbol
LIG4
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JDV02_002902 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptkz03400
]
JDV02_002902 (LIG4)
Enzymes [BR:
ptkz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
JDV02_002902 (LIG4)
DNA repair and recombination proteins [BR:
ptkz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
JDV02_002902 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
DNA_ligase_IV
Bac_globin
Motif
Other DBs
NCBI-GeneID:
72064862
NCBI-ProteinID:
XP_047839952
LinkDB
All DBs
Position
2:join(3670768..3670973,3671026..3673942)
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AA seq
1040 aa
AA seq
DB search
MSFSTPCSRRAPSLSSLSLHSFELIGGSKRASGITKMSRASQTQDSDAQREEEIQYGASD
LRKDELDDKYPNRPRNHSKTLAFHDLFLELFNPLNENKKQPAGGPASKKGPRGAHSLSPQ
EQRRHIIERFITRWRKEVGDDFYPALRLILPDKDRDRGVYGLKESAIGKLLVRLIKIDKN
SEDGYNLLHWKIPGQTMAARLAGDFAGRCFEVISKRPMRTDVGDMTIAEVNEQLDRLAAS
SGEAENLRIFETFYKRMNAEEMMWLIRIILKQMKVGATEKTFLYLWHPDGEALFSVSSSL
RRVCWELYDPEVRLEHEEAGISLMQCFQPQLAQFQMPASFQRMIELLRVTEEDPEFWIEE
KLDGERMQMHMVEDQDHPGGMRFCFWSRKAKDYTYLYGNGFMDDNSALTRHLKNAFASGV
RNLILDGEMITWDMGINKIVPFGTLKTAALSEQQNKSDSDAAGHRPLFRVFDILYLNDKQ
LTQYTLRDRRRALEKAVDPVHRRLEIHSYTPATSADAIEPLLREVVANASEGLVLKNPRS
MYRLNSRNDDWLKVKPEYMSEFGESLDCLIIGGYYGSGRRGGMLSSFLCGLRATQNHIQA
GANPEKCFSFFKVGGGFRGEDYAEIRHHTEGKWIEWDPKNPPSEYIELGGGEAKQLERPD
VWIRPKDSVVVSVKAASVGPSDSFARGITLRFPRFRRLRLDRSWDSALNVEEFQELKKRV
DAESKEKAMTVEDRKRRNPKRVKRQVVIAGEDTAPVAFEGDKSRVFEGLQFCVLSESLKP
YKHTKAQLETIVKENGGAVSQRAAKDMVFIADKKVVKAASLIKDGSVDIIRPRWIKDCLE
QSNDGVGDAAAGYLLPYEECHLFHATDETRAAAMHNTDQYGDSYARDTSVEELRDVLADM
PKLESLGEAFDASVFLRELEERQKGLGDLRGFMFRGCVVHFRPAEEAATAGARQRLLLSK
LARYVEYAGGRVEDALGGGDGVVTHVVIVGDDAMEMGEVADEVRREVSGWRRIPRVVTGG
WVEESWAEKTRLDEEQYAVP
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagcacaccatgtagtcgccgcgctccatcactttcttctctctcactgcac
tctttcgagctaatcggggggtcaaagcgtgcctctggaataaccaagatgagccgcgcg
agccaaacccaggactccgacgctcaacgtgaggaggagattcaatatggcgcctctgac
ttgagaaaggatgagctggatgacaaataccccaaccgcccgaggaaccactccaagacc
ctggcgtttcacgatctcttcctcgagctgttcaacccgctcaatgagaacaagaagcag
ccggcggggggcccagcaagcaaaaagggcccgcgcggcgcccacagcctgtccccgcag
gagcagcgcagacacatcatagagcggttcatcacgcgctggcgtaaggaagtgggcgac
gacttctacccggcgctgcgcctcatcctgccggacaaggaccgcgaccgcggcgtctac
ggcctcaaggagagcgccatcggcaagctacttgtcaggctcatcaagattgacaagaac
tctgaggatggctacaacctcctgcattggaagatccccgggcagaccatggccgcgcgc
ctcgcgggcgactttgccggccgctgcttcgaggtcatctccaagcgcccgatgcggacc
gacgtcggcgatatgaccattgccgaagtcaacgagcagctcgacaggttggcggcgtcg
tcgggcgaggccgagaatctccgcatctttgagacgttttacaagcgcatgaatgccgag
gagatgatgtggctgatccgcatcatcctcaagcagatgaaggtgggcgccacggaaaag
acgttcctctacctgtggcacccggacggcgaggccctcttcagcgtgtcgtcgagcctg
cgccgcgtgtgctgggagctgtacgatccggaggtgcggctcgagcacgaggaggcgggc
atctccctcatgcagtgcttccagccgcagctcgcccagttccagatgccggcgtcattt
cagcgcatgattgagctgttgcgtgtcaccgaagaggaccccgagttctggatcgaggag
aaactcgacggcgagcgcatgcagatgcacatggtcgaggaccaagaccacccgggtggt
atgcgcttctgcttctggtcgagaaaggccaaggactacacctatctatatggcaacggc
ttcatggatgacaattcggcgctgacgaggcacctcaagaatgcctttgcgtcgggcgtg
cgcaacctcattctcgacggcgaaatgatcacttgggacatgggcatcaacaagattgtg
ccgtttgggacgctcaagacggctgccctctccgaacagcagaacaagtccgactcggac
gccgcgggccaccgtccgctatttcgcgtcttcgacattctgtacctcaacgacaagcag
cttacgcagtacacgctgcgcgaccgtcgacgcgccctcgaaaaggccgtcgaccccgtt
catcgccgcctcgagatccactcgtacacgcccgcgacgtcggccgacgccattgagccc
ctgcttcgcgaggtggtggccaacgcctccgagggcctcgtgctcaagaacccgcggtcc
atgtaccggctcaacagccgcaacgacgactggctcaaggtcaagcccgagtacatgtcc
gagtttggcgagtcgctcgactgcctcatcatcggcggctactacggctccgggcgccgc
ggcggcatgttgtcgagcttcctgtgcgggctgcgcgccacgcagaaccacatccaggcg
ggcgccaacccagaaaagtgcttcagcttcttcaaggtcggcggcgggttccgcggcgag
gactacgccgagattcggcaccacaccgagggcaaatggatcgagtgggaccccaagaac
ccgccgtccgagtacattgagctcggcggcggcgaagccaagcagctggagcggccggac
gtgtggatccggcccaaggactcggtcgtcgtgtccgtcaaggcggccagcgtgggaccg
tccgatagcttcgcgcggggcatcacgctgcgcttcccgcggttccgccgtctgaggctc
gaccgcagctgggactcggcgctcaacgtcgaggagttccaggagctcaagaagagggtc
gacgccgagtccaaggagaaagccatgacggtcgaggaccgcaagaggaggaacccgaag
cgcgtgaagcgccaggtcgtcatcgcgggcgaggacacggcgccggtggcgtttgagggc
gacaagtcgcgtgtcttcgagggcctgcagttctgcgtgctgtccgagtcgctcaagccg
tacaagcacaccaaggcccagctcgaaaccattgtcaaggaaaacggcggcgccgtgtcc
cagcgcgctgccaaagacatggttttcatcgcggacaagaaggtcgtcaaggcggccagc
ctgatcaaggacggcagcgtggacattattcgaccccgctggatcaaggactgcctggag
caatccaacgacggcgttggcgatgccgccgcggggtacctcctcccatacgaggaatgc
cacttgttccacgcgacggacgagacgagggcggctgcgatgcacaacacggaccagtac
ggggacagctacgcgcgagacacgtccgtcgaggagctgcgcgacgtcttggccgacatg
ccaaagctggagagcctgggggaggcctttgacgcgtccgtcttcttgcgagagctggag
gagcgacagaaaggcctaggcgacctacgagggttcatgttccgggggtgcgtcgtgcac
tttcggcccgcggaggaggcggcgacggcgggcgcgcggcagcggctgctgctgagcaag
ctggcgcgctatgtcgagtacgcaggcggtcgtgtggaggatgcgctcggaggcggcgac
ggggtggtgacgcatgtggtgattgtaggggacgacgcgatggagatgggtgaggtggcc
gacgaggtgcgcagggaagtgagcggctggcgccggatacccagggtcgtgacgggcggg
tgggtggaggagagctgggcggagaagacgaggctggacgaggaacagtacgcggtgccg
tga
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