Purpureocillium takamizusanense: JDV02_003794
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Entry
JDV02_003794 CDS
T08929
Symbol
SKI3
Name
(RefSeq) Superkiller protein 3
KO
K12600
superkiller protein 3
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JDV02_003794 (SKI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_003794 (SKI3)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
JDV02_003794 (SKI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_2
TPR_8
TPR_14
TPR_17
TPR_1
TPR_12
TPR_11
TPR_7
ANAPC3
TPR_6
DUF4919
TPR_9
TPR_10
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
72065750
NCBI-ProteinID:
XP_047840934
LinkDB
All DBs
Position
3:complement(join(885517..889660,889726..889844))
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AA seq
1420 aa
AA seq
DB search
MSGSKALLKSINDAIRQQNFDDAIEQAQGYLKKDPKNYQALIFLAFALDKTNRLDEAETV
YQNATALRPQDAQAYQGLIKIYEKQGAKKLPEYQRAVVSLAHVFRDADDMFKCQDVVDKF
VDFARAQGDKLQYADALWIQLPDSPLYQVLEGRFPHPARTYETIALILEEFEKKRINTLI
GERRTRLGATLTDVTVEVKREVFSLSKLEHIYRQLINWTSDDDVRRTYEEKLLQHCHDRL
LVAPAAGKADEQAKVRGLASDMVIIKHPFKLAWDIAINWQDHKDIKDWDVNVLREYCGFF
PDSDLYKVITGYLTSAISPFPAPAETEKKAASMAGSDDSEDDDEDGGVPTSFVPLTDDDR
LIMITEGITGTESTFAYRLVGHYFLHLGEYESTVELMRKAQQFAAKERTRTGLSFRNTCD
AYSLSLGTALVYYQSPRHHQEAKALFDKVLEHDETSTPAMIGVGLIFEEEEEYDEAVDYL
TRALGRDPSNIRVRSEAAWVKALKGDWQTAKAELLDCVQQLEQKKADDKDLLADTQYRIG
SCIWNLDSSRQARKQRKGDSAYAYWLAALNSNLNHAPTYTSLGIFYNDYAKDRKRARRCF
QKALELSSAEVVAAERLARSFAEDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAA
LGVAELNKQDVHKAIVSFQAALRLSPGDYHSWVGLGESYHSSGRYIAATKAIMNAQSLET
ESTVDISGDTWFTKYMLANIKRELGDYDESIALYQAVLQTHAGEEGVIIALMQTLVDNAL
ACVEKGLFGKAVQLAMDTIDFAATTSGSVRDTFNFWKSLADACSVFSSVQSRAADFPSQA
TKGLLESGNQQAFDTLSAVDKVATDVVYAPSTNGDGDVMGGSITRCLHATILCHKLAIHV
SSGDIHAQAVAHYNLGWAEFRAHSCLPVPQRKKSGNYVRAAVRAFKRAIELESGNSEFWN
ALGVVTSDINPPVAQHAFVRSLHLNERSPVAWTNLGVLALLSGDMRVANEAFTRAQSADP
DYAHAWLGQGFVALLVGNAKEARGLFTHAMEISEASSVPTRRHYSASTFDHILTAPPNMT
VASLIQPLFALNQLQSLRPQDMAFGHLSTMLQERTREHAPAVQTLEKICDLIEADYEATE
SADSLARFTLAKTDLARAYLAAGSYGQAVECGDMALGLSGDESESELTGEQRKKARLSAH
LTVGLGQYYLEQYDEAQKCFEAALGESDNSPDATCLLAQVLWAQGSEESRDKARSALFEV
IERRPDHVQSVVLLGVIALLDQDEDSLEAVVEELQKLRTNERVTTTEQSHIGEVLRAIAG
LGDGRTEQDMLTQIQQDVMLYPHLPHGWSSLAETTGDPYASQMALEVAVRGIPPRGVLEA
QDLASAYAGTGKAADAQRATMLAPWEKPGWVALEVATAGM
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtccaaggcgctgctcaagtccatcaacgatgcgattcggcagcaaaacttt
gacgatgccatcgagcaggcccagggctacctgaaaaaggaccccaaaaactaccaggcg
ctcatctttctggcctttgccttggacaagacaaaccggcttgacgaggccgagacagtc
taccagaatgccaccgccctgcgtccacaggacgcgcaggcctaccagggcctcatcaaa
atctatgagaagcaaggcgccaagaagctgcccgagtatcagcgggccgtcgtcagcctg
gcccacgtgtttcgcgatgccgacgacatgtttaagtgccaagatgtcgttgacaagttt
gtcgactttgctagggcgcagggcgacaagcttcagtatgccgatgccttgtggatccag
ctcccggacagccccctctaccaggtacttgaagggcgctttccacatcccgcaaggacc
tatgaaaccattgccctcatccttgaagagtttgaaaagaagcgcatcaacacgctcatt
ggggaacgacggacgcgtctaggtgccacattgaccgatgtcaccgtcgaggtcaagcgg
gaggtattttcgctcagcaagctggagcacatctatcgacagttgatcaactggaccagc
gatgatgatgtgaggagaacgtacgaggaaaagctcctccagcactgccatgaccgcctg
ctggtcgcccccgccgctggaaaagcggacgagcaggccaaagtacgtggcctcgcaagc
gacatggtcatcatcaagcaccccttcaagctggcgtgggacattgccatcaactggcaa
gaccacaaagacatcaaggactgggatgtcaacgtcttgcgagagtactgcggcttcttt
cccgacagcgatctttacaaggtcatcacgggctacctgacgagcgccatatcgccgttc
cccgcacccgccgagacagagaagaaggccgcgtcaatggccgggtcagatgacagcgaa
gatgacgatgaggacggcggtgttcccacgtcattcgtcccgctgacagacgacgatcgc
ctcatcatgatcaccgagggcatcacaggcaccgagtccacctttgcgtatcgtttagtc
ggccattactttcttcaccttggcgagtacgagagcacggtcgagctcatgcgcaaggcc
cagcagttcgctgccaaggagcgcacaagaacaggcctctcctttcgcaacacttgtgac
gcgtactcgctttccctgggcacagcgctggtctactaccagtcgcctaggcatcaccaa
gaagccaaagccctatttgacaaggtgcttgagcatgacgagacttcgacgccggccatg
atcggcgtggggctcatctttgaggaagaggaggagtacgatgaggccgttgactaccta
actcgtgcgctcgggcgcgacccctcgaatatccgcgtcaggtctgaggcggcctgggtc
aaggccttgaaaggggactggcagaccgccaaggccgagctcttggactgcgtccagcag
ctggagcaaaagaaagccgacgacaaggatttgctcgctgacactcaataccgtatcggc
tcctgcatttggaacctggactcgagtcggcaggcgagaaaacagcgaaagggcgatagt
gcatatgcatactggctggccgctctcaacagtaacctcaaccacgctccgacatacacc
agccttggcatattctacaacgactacgccaaagatcggaagagagcgcgtcggtgcttc
cagaaggcgctcgagctgtcgtcggcagaggttgtcgccgcggagcgattggcccggtcg
tttgcagaagacggcgactgggatcgggtagagcttgttgcccagcgcgtggtagactcg
ggcaaggtcaaaccaccgcctgggtcgaagaggaagggaatcagctggccgtttgccgcg
ctaggcgtggccgagctcaacaagcaggacgttcacaaagcgattgtgtcgtttcaggcc
gcactcaggctctcgcctggagactaccattcgtgggtcggcttgggcgagagttaccac
agctccgggcgatacattgccgccacaaaggccataatgaatgcacagagcctggagacg
gagagcaccgtcgacatatccggcgacacgtggttcaccaagtacatgctcgccaatatc
aagcgagaactgggcgactatgacgagtcaattgccctatatcaagccgtgctacagact
catgctggagaagagggagtcatcattgcgctaatgcagactctcgtggacaacgctctg
gcatgtgtggaaaagggtttgtttggaaaggctgtccagcttgccatggacaccatcgac
tttgcagccaccacgagtgggagtgtgcgagacacattcaacttttggaagagccttgcg
gacgcttgctccgtgttctcgtctgttcagagtcgtgctgctgattttccatcccaggcc
accaaggggcttttggagagcgggaatcaacaagcttttgacacgctcagtgcagtggac
aaggttgcaacagacgtcgtctatgcccccagcaccaacggagatggagacgtcatgggc
ggcagcattacacggtgccttcacgcaaccattctgtgccacaagctggccattcacgtt
tcctcaggcgacatccatgcgcaagccgtcgcacactacaacttgggctgggccgagttt
cgcgcgcactcatgcttgccggtcccgcagcggaagaagtcgggcaactacgtcagggcc
gcggtgagggcgttcaagcgagccatcgagctggagagtggcaattccgagttttggaac
gcgcttggagtggtgacaagcgacatcaacccgcccgttgcgcaacacgcgttcgtcagg
agcctgcacttgaacgagcgcagcccggtggcttggaccaatctgggggtcttggccttg
ctgtctggtgacatgagggtggcaaacgaggcattcactcgagcacagtcggcagacccg
gactacgcacacgcctggctgggacagggattcgttgcgctgcttgtcggcaacgcaaag
gaggcccggggactcttcacacatgccatggagatttccgaggcctcgtcagttcccaca
cggcggcactactcggcatctaccttcgaccacatcctcacggctccgcctaacatgact
gtggcttctctcatacagccgctatttgcactaaatcagttgcaaagcctgcgccctcaa
gacatggcatttggccatttgtcaaccatgctccaggagcggacgagggagcatgcccct
gcagtgcagacgctggaaaagatttgcgaccttatcgaggctgactatgaggccaccgag
tctgcggacagtcttgcgcggttcacattagcaaagaccgacttggcgagggcgtacctc
gccgccgggtcgtacggccaagccgtggagtgcggcgacatggctctcggcctgagcggt
gacgagagcgagagcgagttgacgggcgagcaacggaagaaggctaggttatcagcgcac
ctgaccgtcggtttagggcaatactacttggagcagtacgacgaggcgcaaaagtgcttc
gaggccgcgctgggagagtcggacaacagccctgacgcgacgtgtcttcttgcccaggtt
ctttgggcgcaaggctcggaggagtcgcgggataaggcccgctcagccctgttcgaagtg
attgagaggcggccggatcatgtccagagtgttgttctgcttggcgtcatcgcgctgcta
gaccaggacgaagatagcctggaagctgtcgtggaggaactccagaagcttcgtaccaac
gaacgcgtcacgacgacggaacagtcgcacattggcgaggtgctccgggccattgccggc
ctgggtgacggccgcacagagcaggacatgttgacgcagatccagcaggacgtgatgctg
tatccgcatctcccgcacgggtggtcgtccctcgcggaaacgacgggcgatccgtacgcg
tcccagatggccctcgaggtggccgtcaggggcataccgccgcggggcgtgctggaggct
caggaccttgccagcgcctatgccggcacgggcaaggccgcggacgcgcagagagctacc
atgcttgcgccatgggagaaacctggatgggtggccctagaggtggccacggcaggcatg
tag
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